Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.23□□□□□ -1.41
Msh4Q99MT2 Mir6374-201ENSMUST00000184003 107 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.23□□□□□ -1.41
Msh4Q99MT2 AC099760.1-201ENSMUST00000196300 153 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC6.23□□□□□ -1.41
Msh4Q99MT2 Gm20946-201ENSMUST00000212367 461 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 Gm18043-201ENSMUST00000216741 739 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.23□□□□□ -1.41
Msh4Q99MT2 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.23□□□□□ -1.41
Msh4Q99MT2 AC174082.2-201ENSMUST00000222094 543 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Msh4Q99MT2 Gm18955-201ENSMUST00000223173 649 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Msh4Q99MT2 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Msh4Q99MT2 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Msh4Q99MT2 Gm37703-201ENSMUST00000192292 1784 ntBASIC6.23□□□□□ -1.41
Msh4Q99MT2 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Msh4Q99MT2 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Msh4Q99MT2 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Msh4Q99MT2 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm14513-201ENSMUST00000117403 123 ntBASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm14747-201ENSMUST00000149888 984 ntBASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm26355-201ENSMUST00000158220 105 ntBASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm9064-201ENSMUST00000163579 566 ntBASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC6.22□□□□□ -1.41
Msh4Q99MT2 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm29160-201ENSMUST00000190094 699 ntBASIC6.22□□□□□ -1.41
Msh4Q99MT2 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm43765-201ENSMUST00000196303 893 ntBASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm44374-201ENSMUST00000199821 140 ntBASIC6.22□□□□□ -1.41
Msh4Q99MT2 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm18838-201ENSMUST00000204855 886 ntBASIC6.22□□□□□ -1.41
Msh4Q99MT2 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.22□□□□□ -1.41
Msh4Q99MT2 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC6.22□□□□□ -1.41
Msh4Q99MT2 CT485612.3-201ENSMUST00000222179 408 ntBASIC6.22□□□□□ -1.41
Msh4Q99MT2 AL645546.2-201ENSMUST00000224526 265 ntBASIC6.22□□□□□ -1.41
Msh4Q99MT2 AC139294.2-201ENSMUST00000227159 285 ntBASIC6.22□□□□□ -1.41
Msh4Q99MT2 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.22□□□□□ -1.41
Msh4Q99MT2 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msh4Q99MT2 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Msh4Q99MT2 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Msh4Q99MT2 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Msh4Q99MT2 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.21□□□□□ -1.41
Msh4Q99MT2 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.21□□□□□ -1.41
Msh4Q99MT2 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Msh4Q99MT2 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Gm43845-201ENSMUST00000202462 1820 ntBASIC6.21□□□□□ -1.42
Msh4Q99MT2 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Gm13207-201ENSMUST00000119862 773 ntBASIC6.21□□□□□ -1.42
Msh4Q99MT2 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.21□□□□□ -1.42
Msh4Q99MT2 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms