Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Dcdc5-202ENSMUST00000122388 4957 ntBASIC5.54□□□□□ -1.52
Scrt1Q99M85 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Gm37106-201ENSMUST00000193760 1532 ntBASIC5.54□□□□□ -1.52
Scrt1Q99M85 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.54□□□□□ -1.52
Scrt1Q99M85 AC131747.2-201ENSMUST00000226121 1895 ntBASIC5.54□□□□□ -1.52
Scrt1Q99M85 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Scrt1Q99M85 AC162936.1-201ENSMUST00000223676 2368 ntBASIC5.54□□□□□ -1.52
Scrt1Q99M85 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Gm15073-201ENSMUST00000117432 634 ntBASIC5.54□□□□□ -1.52
Scrt1Q99M85 Gm11848-201ENSMUST00000121207 973 ntBASIC5.54□□□□□ -1.52
Scrt1Q99M85 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Gm22552-201ENSMUST00000157796 337 ntBASIC5.54□□□□□ -1.52
Scrt1Q99M85 Gm23662-201ENSMUST00000158046 111 ntBASIC5.54□□□□□ -1.52
Scrt1Q99M85 Gm16139-201ENSMUST00000160015 420 ntBASIC5.54□□□□□ -1.52
Scrt1Q99M85 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Gm22548-201ENSMUST00000174899 78 ntBASIC5.54□□□□□ -1.52
Scrt1Q99M85 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.54□□□□□ -1.52
Scrt1Q99M85 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Ighv5-21-201ENSMUST00000191935 295 ntBASIC5.54□□□□□ -1.52
Scrt1Q99M85 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.54□□□□□ -1.52
Scrt1Q99M85 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Gm34149-201ENSMUST00000203547 304 ntBASIC5.54□□□□□ -1.52
Scrt1Q99M85 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC5.54□□□□□ -1.52
Scrt1Q99M85 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC5.54□□□□□ -1.52
Scrt1Q99M85 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scrt1Q99M85 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.54□□□□□ -1.52
Scrt1Q99M85 AC131795.1-201ENSMUST00000219632 426 ntBASIC5.54□□□□□ -1.52
Scrt1Q99M85 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Scrt1Q99M85 AC170086.2-201ENSMUST00000224733 803 ntBASIC5.54□□□□□ -1.52
Scrt1Q99M85 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scrt1Q99M85 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC5.54□□□□□ -1.52
Scrt1Q99M85 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC5.53□□□□□ -1.52
Scrt1Q99M85 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Scrt1Q99M85 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Scrt1Q99M85 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC5.53□□□□□ -1.52
Scrt1Q99M85 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.53□□□□□ -1.52
Scrt1Q99M85 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Scrt1Q99M85 AC130217.2-201ENSMUST00000224009 2990 ntBASIC5.53□□□□□ -1.52
Scrt1Q99M85 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Scrt1Q99M85 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC5.53□□□□□ -1.52
Scrt1Q99M85 AC154630.1-201ENSMUST00000215334 2440 ntBASIC5.53□□□□□ -1.52
Scrt1Q99M85 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Scrt1Q99M85 Gm13428-201ENSMUST00000117540 365 ntBASIC5.53□□□□□ -1.52
Scrt1Q99M85 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Scrt1Q99M85 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Scrt1Q99M85 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC5.53□□□□□ -1.52
Scrt1Q99M85 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Scrt1Q99M85 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC5.53□□□□□ -1.52
Scrt1Q99M85 Gm23031-201ENSMUST00000157998 119 ntBASIC5.53□□□□□ -1.52
Scrt1Q99M85 Gm23799-201ENSMUST00000175559 120 ntBASIC5.53□□□□□ -1.52
Scrt1Q99M85 Mir3090-201ENSMUST00000175597 87 ntBASIC5.53□□□□□ -1.52
Scrt1Q99M85 Gm20778-201ENSMUST00000178524 627 ntBASIC5.53□□□□□ -1.52
Scrt1Q99M85 Gm4617-201ENSMUST00000178993 331 ntBASIC5.53□□□□□ -1.52
Scrt1Q99M85 Gm7745-201ENSMUST00000182235 973 ntBASIC5.53□□□□□ -1.52
Scrt1Q99M85 Mir6986-201ENSMUST00000184483 58 ntBASIC5.53□□□□□ -1.52
Scrt1Q99M85 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC5.53□□□□□ -1.52
Scrt1Q99M85 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC5.53□□□□□ -1.52
Scrt1Q99M85 Gm29197-201ENSMUST00000185922 702 ntBASIC5.53□□□□□ -1.52
Scrt1Q99M85 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC5.53□□□□□ -1.52
Scrt1Q99M85 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC5.53□□□□□ -1.52
Scrt1Q99M85 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.53□□□□□ -1.52
Scrt1Q99M85 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Scrt1Q99M85 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC5.53□□□□□ -1.52
Scrt1Q99M85 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC5.53□□□□□ -1.52
Scrt1Q99M85 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC5.53□□□□□ -1.52
Scrt1Q99M85 Gm4332-201ENSMUST00000196114 346 ntBASIC5.53□□□□□ -1.52
Scrt1Q99M85 Gm3544-201ENSMUST00000196129 305 ntBASIC5.53□□□□□ -1.52
Scrt1Q99M85 Gm5418-201ENSMUST00000206932 528 ntBASIC5.53□□□□□ -1.52
Scrt1Q99M85 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.53□□□□□ -1.52
Scrt1Q99M85 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.53□□□□□ -1.52
Scrt1Q99M85 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.53□□□□□ -1.52
Scrt1Q99M85 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.53□□□□□ -1.52
Scrt1Q99M85 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Scrt1Q99M85 AC125117.2-201ENSMUST00000228344 1140 ntBASIC5.53□□□□□ -1.52
Scrt1Q99M85 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Scrt1Q99M85 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Scrt1Q99M85 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Scrt1Q99M85 AC022682.2-202ENSMUST00000224394 3943 ntBASIC5.53□□□□□ -1.52
Scrt1Q99M85 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Scrt1Q99M85 Gm38178-201ENSMUST00000194502 2471 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms