Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Clp1Q99LI9 Gm43788-201ENSMUST00000201539 2417 ntBASIC7.63□□□□□ -1.19
Clp1Q99LI9 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Clp1Q99LI9 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Clp1Q99LI9 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Clp1Q99LI9 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Clp1Q99LI9 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Clp1Q99LI9 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Clp1Q99LI9 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Clp1Q99LI9 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Clp1Q99LI9 Gm42701-201ENSMUST00000196117 1657 ntBASIC7.63□□□□□ -1.19
Clp1Q99LI9 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Clp1Q99LI9 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Clp1Q99LI9 Gm44695-201ENSMUST00000205567 1631 ntBASIC7.63□□□□□ -1.19
Clp1Q99LI9 Gm20644-201ENSMUST00000176721 2063 ntBASIC7.63□□□□□ -1.19
Clp1Q99LI9 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Clp1Q99LI9 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clp1Q99LI9 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Gm13176-201ENSMUST00000117910 477 ntBASIC7.62□□□□□ -1.19
Clp1Q99LI9 Gm11501-201ENSMUST00000118039 581 ntBASIC7.62□□□□□ -1.19
Clp1Q99LI9 Gm16016-201ENSMUST00000120831 550 ntBASIC7.62□□□□□ -1.19
Clp1Q99LI9 Gm15187-201ENSMUST00000122329 264 ntBASIC7.62□□□□□ -1.19
Clp1Q99LI9 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC7.62□□□□□ -1.19
Clp1Q99LI9 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Mir1953-201ENSMUST00000157866 89 ntBASIC7.62□□□□□ -1.19
Clp1Q99LI9 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Mir5617-201ENSMUST00000176786 57 ntBASIC7.62□□□□□ -1.19
Clp1Q99LI9 Gm24969-201ENSMUST00000180331 79 ntBASIC7.62□□□□□ -1.19
Clp1Q99LI9 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
Clp1Q99LI9 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Gm27225-201ENSMUST00000183833 557 ntBASIC7.62□□□□□ -1.19
Clp1Q99LI9 Gm29509-201ENSMUST00000185716 321 ntBASIC7.62□□□□□ -1.19
Clp1Q99LI9 Gm28489-201ENSMUST00000186655 316 ntBASIC7.62□□□□□ -1.19
Clp1Q99LI9 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Gm43708-201ENSMUST00000198857 961 ntBASIC7.62□□□□□ -1.19
Clp1Q99LI9 Gm44058-201ENSMUST00000204335 467 ntBASIC7.62□□□□□ -1.19
Clp1Q99LI9 Gm17987-201ENSMUST00000206902 603 ntBASIC7.62□□□□□ -1.19
Clp1Q99LI9 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Clp1Q99LI9 AL603630.1-201ENSMUST00000214781 147 ntBASIC7.62□□□□□ -1.19
Clp1Q99LI9 AC069561.2-201ENSMUST00000217596 420 ntBASIC7.62□□□□□ -1.19
Clp1Q99LI9 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC7.62□□□□□ -1.19
Clp1Q99LI9 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC7.62□□□□□ -1.19
Clp1Q99LI9 AC154506.3-201ENSMUST00000225417 213 ntBASIC7.62□□□□□ -1.19
Clp1Q99LI9 AC140393.2-201ENSMUST00000226894 943 ntBASIC7.62□□□□□ -1.19
Clp1Q99LI9 AC133283.1-201ENSMUST00000228443 859 ntBASIC7.62□□□□□ -1.19
Clp1Q99LI9 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clp1Q99LI9 CT009757.4-201ENSMUST00000221520 2541 ntBASIC7.62□□□□□ -1.19
Clp1Q99LI9 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Gm36963-201ENSMUST00000193506 2324 ntBASIC7.62□□□□□ -1.19
Clp1Q99LI9 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC7.62□□□□□ -1.19
Clp1Q99LI9 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC7.62□□□□□ -1.19
Clp1Q99LI9 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clp1Q99LI9 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
Clp1Q99LI9 Gm44742-201ENSMUST00000207190 1412 ntBASIC7.61□□□□□ -1.19
Clp1Q99LI9 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Clp1Q99LI9 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Clp1Q99LI9 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC7.61□□□□□ -1.19
Clp1Q99LI9 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC7.61□□□□□ -1.19
Clp1Q99LI9 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.61□□□□□ -1.19
Clp1Q99LI9 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC7.61□□□□□ -1.19
Clp1Q99LI9 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Clp1Q99LI9 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Clp1Q99LI9 AC151984.1-201ENSMUST00000218261 2976 ntBASIC7.61□□□□□ -1.19
Clp1Q99LI9 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Clp1Q99LI9 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Clp1Q99LI9 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC7.61□□□□□ -1.19
Clp1Q99LI9 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
Clp1Q99LI9 Mir680-1-201ENSMUST00000102257 109 ntBASIC7.61□□□□□ -1.19
Clp1Q99LI9 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Clp1Q99LI9 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Clp1Q99LI9 Gm13367-201ENSMUST00000119955 796 ntBASIC7.61□□□□□ -1.19
Clp1Q99LI9 Gm15763-201ENSMUST00000120136 403 ntBASIC7.61□□□□□ -1.19
Clp1Q99LI9 Gm15388-201ENSMUST00000121578 726 ntBASIC7.61□□□□□ -1.19
Clp1Q99LI9 Gm15157-201ENSMUST00000121852 702 ntBASIC7.61□□□□□ -1.19
Clp1Q99LI9 Gm11341-201ENSMUST00000122316 447 ntBASIC7.61□□□□□ -1.19
Clp1Q99LI9 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC7.61□□□□□ -1.19
Clp1Q99LI9 Gm9064-201ENSMUST00000163579 566 ntBASIC7.61□□□□□ -1.19
Clp1Q99LI9 Gm8323-201ENSMUST00000168436 1201 ntBASIC7.61□□□□□ -1.19
Clp1Q99LI9 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC7.61□□□□□ -1.19
Clp1Q99LI9 Gm18588-201ENSMUST00000177308 492 ntBASIC7.61□□□□□ -1.19
Clp1Q99LI9 Gm4904-201ENSMUST00000178243 1195 ntBASIC7.61□□□□□ -1.19
Clp1Q99LI9 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Clp1Q99LI9 Gm2871-201ENSMUST00000179984 1204 ntBASIC7.61□□□□□ -1.19
Clp1Q99LI9 Gm10410-201ENSMUST00000180138 384 ntBASIC7.61□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms