Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Robo2-210ENSMUST00000226478 8059 ntBASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Gm13702-201ENSMUST00000118542 825 ntBASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Gm15696-201ENSMUST00000121730 445 ntBASIC6.33□□□□□ -1.4
Trub1Q8C0D0 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.33□□□□□ -1.4
Trub1Q8C0D0 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Cfhr3-201ENSMUST00000170441 1022 ntBASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Gm18808-201ENSMUST00000173316 462 ntBASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Mir7212-201ENSMUST00000184098 61 ntBASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Gm21877-201ENSMUST00000185640 694 ntBASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Gm5260-201ENSMUST00000186157 949 ntBASIC6.33□□□□□ -1.4
Trub1Q8C0D0 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.32□□□□□ -1.4
Trub1Q8C0D0 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Gm15187-201ENSMUST00000122329 264 ntBASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Gm29464-201ENSMUST00000187692 513 ntBASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Gm28918-201ENSMUST00000188822 699 ntBASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Gm36378-201ENSMUST00000201709 388 ntBASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 AC165260.3-201ENSMUST00000225101 665 ntBASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trub1Q8C0D0 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trub1Q8C0D0 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.31□□□□□ -1.4
Trub1Q8C0D0 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trub1Q8C0D0 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.31□□□□□ -1.4
Trub1Q8C0D0 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.31□□□□□ -1.4
Trub1Q8C0D0 Gm9521-201ENSMUST00000206656 1516 ntBASIC6.31□□□□□ -1.4
Trub1Q8C0D0 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trub1Q8C0D0 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trub1Q8C0D0 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Trub1Q8C0D0 n-R5s172-201ENSMUST00000104508 114 ntBASIC6.31□□□□□ -1.4
Trub1Q8C0D0 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trub1Q8C0D0 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Trub1Q8C0D0 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trub1Q8C0D0 Gm13768-201ENSMUST00000116469 929 ntBASIC6.31□□□□□ -1.4
Trub1Q8C0D0 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Trub1Q8C0D0 Gm9506-201ENSMUST00000118516 320 ntBASIC6.31□□□□□ -1.4
Trub1Q8C0D0 Gm12262-201ENSMUST00000119915 305 ntBASIC6.31□□□□□ -1.4
Trub1Q8C0D0 Gm12396-201ENSMUST00000121600 306 ntBASIC6.31□□□□□ -1.4
Trub1Q8C0D0 Gm12438-201ENSMUST00000122034 336 ntBASIC6.31□□□□□ -1.4
Trub1Q8C0D0 Gm14349-201ENSMUST00000137155 902 ntBASIC6.31□□□□□ -1.4
Trub1Q8C0D0 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.31□□□□□ -1.4
Trub1Q8C0D0 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms