Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Platr11-201ENSMUST00000182885 388 ntTSL 3 BASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm7329-201ENSMUST00000185915 210 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm38086-201ENSMUST00000193543 434 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm5043-201ENSMUST00000202103 820 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm18009-201ENSMUST00000203239 1016 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm44075-201ENSMUST00000204208 216 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm33178-201ENSMUST00000212090 257 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Calb2-202ENSMUST00000212297 1080 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm45742-201ENSMUST00000212400 433 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC9.15□□□□□ -0.94
Trim35Q8C006 AC124173.1-201ENSMUST00000223701 189 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim35Q8C006 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Trim35Q8C006 Gm26397-201ENSMUST00000083703 134 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Olfr203-201ENSMUST00000089305 924 ntBASIC9.15□□□□□ -0.94
Trim35Q8C006 Serping1-202ENSMUST00000111641 1665 ntTSL 5 BASIC9.15□□□□□ -0.94
Trim35Q8C006 Ncaph2-202ENSMUST00000074552 3299 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim35Q8C006 Zfp820-201ENSMUST00000084141 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim35Q8C006 Nsg2-202ENSMUST00000093219 1974 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Trim35Q8C006 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC9.15□□□□□ -0.95
Trim35Q8C006 Snhg7os-202ENSMUST00000131841 3947 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Trim35Q8C006 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Trim35Q8C006 AC093022.3-201ENSMUST00000226569 1926 ntBASIC9.15□□□□□ -0.95
Trim35Q8C006 Gm4890-201ENSMUST00000181030 3784 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Trim35Q8C006 Gm44037-201ENSMUST00000204816 1891 ntBASIC9.15□□□□□ -0.95
Trim35Q8C006 Tmem144-202ENSMUST00000168038 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trim35Q8C006 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trim35Q8C006 Dcstamp-203ENSMUST00000227368 1825 ntBASIC9.15□□□□□ -0.95
Trim35Q8C006 Me1-202ENSMUST00000185374 3292 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Gm43330-201ENSMUST00000199706 2153 ntBASIC9.14□□□□□ -0.95
Trim35Q8C006 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trim35Q8C006 Vps8-201ENSMUST00000096191 4952 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trim35Q8C006 Ccdc33-203ENSMUST00000098682 3117 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 4933427I22Rik-202ENSMUST00000153921 1378 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trim35Q8C006 Myom1-203ENSMUST00000179759 5308 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trim35Q8C006 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trim35Q8C006 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trim35Q8C006 Ano7-202ENSMUST00000186641 3984 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
Trim35Q8C006 Oprl1-202ENSMUST00000108763 2971 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Trim43b-201ENSMUST00000167113 2262 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Gm12353-201ENSMUST00000108250 554 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Trim35Q8C006 Gm13046-201ENSMUST00000117391 501 ntBASIC9.14□□□□□ -0.95
Trim35Q8C006 Gm13518-201ENSMUST00000120018 233 ntBASIC9.14□□□□□ -0.95
Trim35Q8C006 Gm23206-201ENSMUST00000122720 184 ntBASIC9.14□□□□□ -0.95
Trim35Q8C006 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC9.14□□□□□ -0.95
Trim35Q8C006 Gm22282-201ENSMUST00000158524 312 ntBASIC9.14□□□□□ -0.95
Trim35Q8C006 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC9.14□□□□□ -0.95
Trim35Q8C006 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC9.14□□□□□ -0.95
Trim35Q8C006 Gm27941-201ENSMUST00000183418 142 ntBASIC9.14□□□□□ -0.95
Trim35Q8C006 Gm29397-201ENSMUST00000185205 333 ntBASIC9.14□□□□□ -0.95
Trim35Q8C006 Gm10318-201ENSMUST00000186874 930 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Trim35Q8C006 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC9.14□□□□□ -0.95
Trim35Q8C006 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC9.14□□□□□ -0.95
Trim35Q8C006 Mef2c-219ENSMUST00000198217 1257 ntTSL 5 BASIC9.14□□□□□ -0.95
Trim35Q8C006 Gm2796-201ENSMUST00000204007 496 ntBASIC9.14□□□□□ -0.95
Trim35Q8C006 Zg16-202ENSMUST00000205424 682 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Trim35Q8C006 Gm45134-201ENSMUST00000206046 1189 ntBASIC9.14□□□□□ -0.95
Trim35Q8C006 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC9.14□□□□□ -0.95
Trim35Q8C006 AC127562.1-201ENSMUST00000226174 572 ntBASIC9.14□□□□□ -0.95
Trim35Q8C006 AC166369.1-201ENSMUST00000228126 351 ntBASIC9.14□□□□□ -0.95
Trim35Q8C006 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Zg16-201ENSMUST00000051122 636 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Gm23733-201ENSMUST00000083750 106 ntBASIC9.14□□□□□ -0.95
Trim35Q8C006 Pgr15l-201ENSMUST00000033556 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
Trim35Q8C006 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Arl14epl-201ENSMUST00000097580 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Trim35Q8C006 Elp3-203ENSMUST00000225355 2771 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Trim35Q8C006 Ak7-201ENSMUST00000040876 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Tmem63c-201ENSMUST00000110187 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Myom1-201ENSMUST00000024847 5354 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trim35Q8C006 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Olfr557-202ENSMUST00000215423 2680 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trim35Q8C006 AC134869.1-201ENSMUST00000225230 2354 ntBASIC9.14□□□□□ -0.95
Trim35Q8C006 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Trp63-201ENSMUST00000040231 4703 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Mcm6-203ENSMUST00000190495 4355 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Zfp383-201ENSMUST00000186475 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Mapk6-201ENSMUST00000049355 4072 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Csf3r-202ENSMUST00000106162 3481 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim35Q8C006 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm21379-201ENSMUST00000179772 1955 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 1700092E19Rik-202ENSMUST00000154703 1650 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm37372-201ENSMUST00000193577 3311 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC9.13□□□□□ -0.95
Trim35Q8C006 Cblb-206ENSMUST00000227879 3866 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm28905-202ENSMUST00000219328 1377 ntTSL 5 BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms