Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC8.69□□□□□ -1.02
Usp47Q8BY87 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC8.69□□□□□ -1.02
Usp47Q8BY87 Gm18689-201ENSMUST00000203969 902 ntBASIC8.69□□□□□ -1.02
Usp47Q8BY87 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC8.69□□□□□ -1.02
Usp47Q8BY87 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC8.69□□□□□ -1.02
Usp47Q8BY87 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Usp47Q8BY87 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usp47Q8BY87 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Usp47Q8BY87 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Usp47Q8BY87 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC8.69□□□□□ -1.02
Usp47Q8BY87 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Usp47Q8BY87 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Usp47Q8BY87 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Usp47Q8BY87 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usp47Q8BY87 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gm15781-201ENSMUST00000120216 323 ntBASIC8.68□□□□□ -1.02
Usp47Q8BY87 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gm14349-201ENSMUST00000137155 902 ntBASIC8.68□□□□□ -1.02
Usp47Q8BY87 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gm7152-201ENSMUST00000163570 605 ntBASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gm27854-201ENSMUST00000175578 244 ntBASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gm19560-201ENSMUST00000177510 514 ntBASIC8.68□□□□□ -1.02
Usp47Q8BY87 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Mir8097-201ENSMUST00000185150 119 ntBASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gm29111-201ENSMUST00000188823 696 ntBASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gm28584-201ENSMUST00000191489 696 ntBASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gm38138-201ENSMUST00000193274 696 ntBASIC8.68□□□□□ -1.02
Usp47Q8BY87 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gm37991-201ENSMUST00000194297 696 ntBASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gm44940-201ENSMUST00000206225 1247 ntBASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gm45850-201ENSMUST00000212536 338 ntBASIC8.68□□□□□ -1.02
Usp47Q8BY87 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC8.68□□□□□ -1.02
Usp47Q8BY87 AC113198.1-201ENSMUST00000226353 832 ntBASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gm44043-201ENSMUST00000203426 3253 ntBASIC8.68□□□□□ -1.02
Usp47Q8BY87 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Usp47Q8BY87 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Usp47Q8BY87 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Usp47Q8BY87 Gm10862-201ENSMUST00000193956 3350 ntBASIC8.67□□□□□ -1.02
Usp47Q8BY87 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Usp47Q8BY87 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC8.67□□□□□ -1.02
Usp47Q8BY87 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Usp47Q8BY87 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Usp47Q8BY87 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Usp47Q8BY87 Gm14783-201ENSMUST00000118900 663 ntBASIC8.67□□□□□ -1.02
Usp47Q8BY87 Mup-ps16-201ENSMUST00000120085 596 ntBASIC8.67□□□□□ -1.02
Usp47Q8BY87 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Usp47Q8BY87 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Usp47Q8BY87 Snora47-201ENSMUST00000157483 138 ntBASIC8.67□□□□□ -1.02
Usp47Q8BY87 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC8.67□□□□□ -1.02
Usp47Q8BY87 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC8.67□□□□□ -1.02
Usp47Q8BY87 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
Usp47Q8BY87 Gm2058-201ENSMUST00000178791 560 ntBASIC8.67□□□□□ -1.02
Usp47Q8BY87 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC8.67□□□□□ -1.02
Usp47Q8BY87 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Usp47Q8BY87 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC8.67□□□□□ -1.02
Usp47Q8BY87 Mir7685-201ENSMUST00000183555 62 ntBASIC8.67□□□□□ -1.02
Usp47Q8BY87 Mir7674-201ENSMUST00000184964 63 ntBASIC8.67□□□□□ -1.02
Usp47Q8BY87 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Usp47Q8BY87 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC8.67□□□□□ -1.02
Usp47Q8BY87 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC8.67□□□□□ -1.02
Usp47Q8BY87 Gm44221-201ENSMUST00000203552 388 ntBASIC8.67□□□□□ -1.02
Usp47Q8BY87 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC8.67□□□□□ -1.02
Usp47Q8BY87 Gm18618-201ENSMUST00000222211 473 ntBASIC8.67□□□□□ -1.02
Usp47Q8BY87 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Usp47Q8BY87 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC8.67□□□□□ -1.02
Usp47Q8BY87 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Usp47Q8BY87 AC125328.1-201ENSMUST00000226812 2265 ntBASIC8.67□□□□□ -1.02
Usp47Q8BY87 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Usp47Q8BY87 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Usp47Q8BY87 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
Usp47Q8BY87 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC8.67□□□□□ -1.02
Usp47Q8BY87 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Usp47Q8BY87 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC8.67□□□□□ -1.02
Usp47Q8BY87 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Usp47Q8BY87 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Usp47Q8BY87 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Usp47Q8BY87 Gm37206-201ENSMUST00000195512 3069 ntBASIC8.66□□□□□ -1.02
Usp47Q8BY87 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Usp47Q8BY87 Gm37913-201ENSMUST00000192925 2544 ntBASIC8.66□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms