Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Gm27006-201ENSMUST00000182218 943 ntBASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Gm3785-201ENSMUST00000221000 202 ntBASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Gm7155-201ENSMUST00000121143 1671 ntBASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Nup98Q6PFD9 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Nup98Q6PFD9 Gm12057-201ENSMUST00000117244 1427 ntBASIC7.21□□□□□ -1.25
Nup98Q6PFD9 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
Nup98Q6PFD9 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.25
Nup98Q6PFD9 Gm15950-201ENSMUST00000162902 1973 ntBASIC7.21□□□□□ -1.25
Nup98Q6PFD9 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Gm13533-201ENSMUST00000121104 177 ntBASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Gm11990-201ENSMUST00000121505 897 ntBASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Gm5401-201ENSMUST00000122444 365 ntBASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Gm22959-201ENSMUST00000122514 303 ntBASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Gm24719-201ENSMUST00000157520 110 ntBASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Gm23945-201ENSMUST00000179609 92 ntBASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Gm27225-201ENSMUST00000183833 557 ntBASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Gm29111-201ENSMUST00000188823 696 ntBASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Gm28584-201ENSMUST00000191489 696 ntBASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Gm38138-201ENSMUST00000193274 696 ntBASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Gm37991-201ENSMUST00000194297 696 ntBASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Gm5554-201ENSMUST00000199726 1206 ntBASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Gm44984-201ENSMUST00000207802 394 ntBASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Gm6477-201ENSMUST00000217098 764 ntBASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Gm23330-201ENSMUST00000082660 164 ntBASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Mir143-201ENSMUST00000083511 63 ntBASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Mir331-201ENSMUST00000083673 96 ntBASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Nup98Q6PFD9 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm37216-201ENSMUST00000193817 3478 ntBASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm24359-201ENSMUST00000158418 221 ntBASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm23149-201ENSMUST00000158837 230 ntBASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm27849-201ENSMUST00000183673 125 ntBASIC7.2□□□□□ -1.26
Nup98Q6PFD9 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm37358-201ENSMUST00000195492 479 ntBASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm44494-201ENSMUST00000196760 129 ntBASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Ass-ps1-201ENSMUST00000197717 761 ntBASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Mir219c-201ENSMUST00000199860 60 ntBASIC7.2□□□□□ -1.26
Nup98Q6PFD9 AC132384.3-201ENSMUST00000219709 472 ntBASIC7.2□□□□□ -1.26
Nup98Q6PFD9 AC132954.2-201ENSMUST00000222400 403 ntBASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm28379-202ENSMUST00000187676 2896 ntBASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm6820-201ENSMUST00000188803 2173 ntBASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm4962-201ENSMUST00000199640 2977 ntBASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm14842-201ENSMUST00000119577 269 ntBASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm12494-201ENSMUST00000121684 521 ntBASIC7.2□□□□□ -1.26
Nup98Q6PFD9 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 172.6 ms