Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 AC159205.2-201ENSMUST00000223759 816 ntBASIC8.63□□□□□ -1.03
Usp48Q3V0C5 AC161252.2-201ENSMUST00000224978 374 ntBASIC8.63□□□□□ -1.03
Usp48Q3V0C5 AC131068.1-201ENSMUST00000226891 482 ntBASIC8.63□□□□□ -1.03
Usp48Q3V0C5 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp48Q3V0C5 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp48Q3V0C5 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp48Q3V0C5 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Usp48Q3V0C5 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp48Q3V0C5 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usp48Q3V0C5 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Usp48Q3V0C5 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp48Q3V0C5 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usp48Q3V0C5 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Usp48Q3V0C5 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp48Q3V0C5 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp48Q3V0C5 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Usp48Q3V0C5 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Usp48Q3V0C5 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Usp48Q3V0C5 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Usp48Q3V0C5 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usp48Q3V0C5 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Usp48Q3V0C5 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC8.63□□□□□ -1.03
Usp48Q3V0C5 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm42969-201ENSMUST00000199858 3631 ntBASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm42898-201ENSMUST00000200370 3073 ntBASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm15310-201ENSMUST00000117891 372 ntBASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm9005-201ENSMUST00000119908 607 ntBASIC8.62□□□□□ -1.03
Usp48Q3V0C5 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm24363-201ENSMUST00000158440 311 ntBASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm20454-201ENSMUST00000172713 221 ntBASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm28639-201ENSMUST00000191519 481 ntBASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm7733-201ENSMUST00000199038 919 ntBASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm30708-201ENSMUST00000202183 312 ntBASIC8.62□□□□□ -1.03
Usp48Q3V0C5 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm9373-201ENSMUST00000208724 599 ntBASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm18469-201ENSMUST00000208850 439 ntBASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm2221-201ENSMUST00000209342 418 ntBASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm19709-201ENSMUST00000215403 482 ntBASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 AC139845.2-201ENSMUST00000227504 436 ntBASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 AC122357.2-201ENSMUST00000220732 1525 ntBASIC8.62□□□□□ -1.03
Usp48Q3V0C5 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm45221-201ENSMUST00000207822 2272 ntBASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm7337-202ENSMUST00000181439 2655 ntBASIC8.62□□□□□ -1.03
Usp48Q3V0C5 CT010577.1-202ENSMUST00000226187 1903 ntBASIC8.62□□□□□ -1.03
Usp48Q3V0C5 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 AC166574.5-201ENSMUST00000227438 1432 ntBASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Gm10258-201ENSMUST00000091270 2123 ntBASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Usp48Q3V0C5 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Usp48Q3V0C5 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Usp48Q3V0C5 Gm43612-201ENSMUST00000196087 3207 ntBASIC8.61□□□□□ -1.03
Usp48Q3V0C5 Gm37100-201ENSMUST00000193344 1353 ntBASIC8.61□□□□□ -1.03
Usp48Q3V0C5 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
Usp48Q3V0C5 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Usp48Q3V0C5 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC8.61□□□□□ -1.03
Usp48Q3V0C5 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
Usp48Q3V0C5 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC8.61□□□□□ -1.03
Usp48Q3V0C5 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Usp48Q3V0C5 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC8.61□□□□□ -1.03
Usp48Q3V0C5 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Usp48Q3V0C5 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Usp48Q3V0C5 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC8.61□□□□□ -1.03
Usp48Q3V0C5 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Usp48Q3V0C5 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Usp48Q3V0C5 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Usp48Q3V0C5 Gm23979-201ENSMUST00000104071 128 ntBASIC8.61□□□□□ -1.03
Usp48Q3V0C5 Gm16458-201ENSMUST00000121428 502 ntBASIC8.61□□□□□ -1.03
Usp48Q3V0C5 Gm8080-201ENSMUST00000122046 1155 ntBASIC8.61□□□□□ -1.03
Usp48Q3V0C5 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Usp48Q3V0C5 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC8.61□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms