Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm27348-201ENSMUST00000184511 170 ntBASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Gm43744-201ENSMUST00000196387 688 ntBASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Gm44837-201ENSMUST00000206863 717 ntBASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 AC122290.1-201ENSMUST00000225631 1078 ntBASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Gm22300-201ENSMUST00000082661 126 ntBASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Gm22351-201ENSMUST00000083925 107 ntBASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Gm29663-201ENSMUST00000186962 853 ntBASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Gm37265-201ENSMUST00000191698 885 ntBASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Gm6119-201ENSMUST00000193443 1206 ntBASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Gm43762-201ENSMUST00000201521 295 ntBASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Gm18290-201ENSMUST00000202900 844 ntBASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Gm5306-201ENSMUST00000203325 757 ntBASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 AC154219.1-201ENSMUST00000220764 1262 ntBASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 n-R5s180-201ENSMUST00000082770 106 ntBASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Upf3bQ3ULL6 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Snora35-201ENSMUST00000104579 128 ntBASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm22952-201ENSMUST00000116720 120 ntBASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm25219-201ENSMUST00000157545 330 ntBASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm16269-201ENSMUST00000160532 409 ntBASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm18006-201ENSMUST00000177411 662 ntBASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms