Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm17061-201ENSMUST00000163167 499 ntBASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Gm16456-201ENSMUST00000174431 920 ntBASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Gm37439-201ENSMUST00000193150 856 ntBASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Gm38305-201ENSMUST00000194825 223 ntBASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Gm18428-201ENSMUST00000194986 791 ntBASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Gm43895-201ENSMUST00000203219 855 ntBASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Gm44943-201ENSMUST00000207254 300 ntBASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Gm18562-201ENSMUST00000209949 915 ntBASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 AC124778.1-201ENSMUST00000216013 162 ntBASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 AC159242.1-201ENSMUST00000225832 194 ntBASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Vmn1r41-204ENSMUST00000227039 985 ntBASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Vmn1r41-205ENSMUST00000227630 827 ntBASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 AC154738.3-201ENSMUST00000227953 409 ntBASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Glipr1-201ENSMUST00000074805 1081 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Gm25852-201ENSMUST00000082790 130 ntBASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Gm10029-201ENSMUST00000089635 330 ntBASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Gm17199-201ENSMUST00000097296 416 ntBASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccbe1Q3MI99 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 AC123705.3-201ENSMUST00000223531 2069 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm37930-201ENSMUST00000194308 1886 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm22934-201ENSMUST00000103961 132 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm11882-201ENSMUST00000121463 506 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm14848-201ENSMUST00000121850 467 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm14251-201ENSMUST00000122133 279 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm8577-201ENSMUST00000122420 986 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm25372-201ENSMUST00000158161 255 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm24899-201ENSMUST00000158892 73 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm16558-201ENSMUST00000163015 532 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm4613-201ENSMUST00000165488 276 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm17511-201ENSMUST00000172206 342 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm17907-201ENSMUST00000173150 710 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm28006-201ENSMUST00000183841 122 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm27782-201ENSMUST00000185059 199 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm3605-201ENSMUST00000185858 440 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms