Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
NcanP55066 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
NcanP55066 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
NcanP55066 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC6.76□□□□□ -1.33
NcanP55066 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
NcanP55066 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
NcanP55066 Gm42661-201ENSMUST00000202364 1442 ntBASIC6.76□□□□□ -1.33
NcanP55066 Gm42561-201ENSMUST00000202563 1442 ntBASIC6.76□□□□□ -1.33
NcanP55066 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
NcanP55066 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NcanP55066 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
NcanP55066 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NcanP55066 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NcanP55066 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
NcanP55066 Gm37953-201ENSMUST00000195293 1884 ntBASIC6.75□□□□□ -1.33
NcanP55066 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
NcanP55066 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.75□□□□□ -1.33
NcanP55066 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
NcanP55066 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
NcanP55066 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NcanP55066 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NcanP55066 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
NcanP55066 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC6.75□□□□□ -1.33
NcanP55066 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.75□□□□□ -1.33
NcanP55066 Gm13077-201ENSMUST00000121941 484 ntBASIC6.75□□□□□ -1.33
NcanP55066 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC6.75□□□□□ -1.33
NcanP55066 Mir1970-201ENSMUST00000157839 104 ntBASIC6.75□□□□□ -1.33
NcanP55066 Gm22789-201ENSMUST00000157884 130 ntBASIC6.75□□□□□ -1.33
NcanP55066 Gm23280-201ENSMUST00000157905 139 ntBASIC6.75□□□□□ -1.33
NcanP55066 Gm23513-201ENSMUST00000158181 133 ntBASIC6.75□□□□□ -1.33
NcanP55066 Gm25605-201ENSMUST00000158364 124 ntBASIC6.75□□□□□ -1.33
NcanP55066 Gm16269-201ENSMUST00000160532 409 ntBASIC6.75□□□□□ -1.33
NcanP55066 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.75□□□□□ -1.33
NcanP55066 Gm6931-201ENSMUST00000183103 371 ntBASIC6.75□□□□□ -1.33
NcanP55066 Gm28196-201ENSMUST00000187719 640 ntBASIC6.75□□□□□ -1.33
NcanP55066 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC6.75□□□□□ -1.33
NcanP55066 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.75□□□□□ -1.33
NcanP55066 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
NcanP55066 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
NcanP55066 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NcanP55066 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC6.75□□□□□ -1.33
NcanP55066 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
NcanP55066 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NcanP55066 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NcanP55066 Gm10693-201ENSMUST00000144146 2037 ntBASIC6.75□□□□□ -1.33
NcanP55066 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
NcanP55066 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
NcanP55066 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NcanP55066 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NcanP55066 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NcanP55066 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
NcanP55066 Gm42681-201ENSMUST00000197999 1611 ntBASIC6.75□□□□□ -1.33
NcanP55066 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
NcanP55066 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.75□□□□□ -1.33
NcanP55066 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
NcanP55066 Gm42549-201ENSMUST00000202392 7004 ntBASIC6.75□□□□□ -1.33
NcanP55066 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NcanP55066 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.75□□□□□ -1.33
NcanP55066 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NcanP55066 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
NcanP55066 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NcanP55066 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
NcanP55066 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NcanP55066 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NcanP55066 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC6.74□□□□□ -1.33
NcanP55066 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NcanP55066 Gm42436-201ENSMUST00000198804 3656 ntBASIC6.74□□□□□ -1.33
NcanP55066 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NcanP55066 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
NcanP55066 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NcanP55066 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NcanP55066 Gm13998-201ENSMUST00000120952 335 ntBASIC6.74□□□□□ -1.33
NcanP55066 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NcanP55066 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.74□□□□□ -1.33
NcanP55066 Gm25427-201ENSMUST00000157605 103 ntBASIC6.74□□□□□ -1.33
NcanP55066 Gm23149-201ENSMUST00000158837 230 ntBASIC6.74□□□□□ -1.33
NcanP55066 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
NcanP55066 Gm22132-201ENSMUST00000175316 100 ntBASIC6.74□□□□□ -1.33
NcanP55066 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.74□□□□□ -1.33
NcanP55066 Gm24303-201ENSMUST00000178237 126 ntBASIC6.74□□□□□ -1.33
NcanP55066 Mir6907-201ENSMUST00000183764 71 ntBASIC6.74□□□□□ -1.33
NcanP55066 Gm37376-201ENSMUST00000192176 453 ntBASIC6.74□□□□□ -1.33
NcanP55066 Gm37770-201ENSMUST00000192855 772 ntBASIC6.74□□□□□ -1.33
NcanP55066 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NcanP55066 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC6.74□□□□□ -1.33
NcanP55066 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.74□□□□□ -1.33
NcanP55066 Mir219c-201ENSMUST00000199860 60 ntBASIC6.74□□□□□ -1.33
NcanP55066 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.74□□□□□ -1.33
NcanP55066 Gm19900-201ENSMUST00000207285 576 ntBASIC6.74□□□□□ -1.33
NcanP55066 CT030170.4-202ENSMUST00000221109 540 ntBASIC6.74□□□□□ -1.33
NcanP55066 AC168056.2-201ENSMUST00000223591 269 ntBASIC6.74□□□□□ -1.33
NcanP55066 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.74□□□□□ -1.33
NcanP55066 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NcanP55066 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NcanP55066 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
NcanP55066 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NcanP55066 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NcanP55066 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
NcanP55066 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NcanP55066 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 116.5 ms