Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC7.3□□□□□ -1.24
Sox1P53783 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC7.3□□□□□ -1.24
Sox1P53783 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Sox1P53783 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Sox1P53783 AC159188.2-201ENSMUST00000224103 1301 ntBASIC7.3□□□□□ -1.24
Sox1P53783 4921517D22Rik-201ENSMUST00000061597 3149 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC7.3□□□□□ -1.24
Sox1P53783 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Sox1P53783 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Sox1P53783 AC153881.3-201ENSMUST00000218494 1561 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 Gm17575-201ENSMUST00000180437 1991 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 Gm13058-201ENSMUST00000117097 1435 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 Mir674-201ENSMUST00000102421 100 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Snord88a-201ENSMUST00000116723 90 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Gm15578-201ENSMUST00000117320 475 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Gm16221-201ENSMUST00000117331 393 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Gm14893-201ENSMUST00000117904 282 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Gm12955-201ENSMUST00000119689 957 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Gm6977-201ENSMUST00000121568 512 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC7.3□□□□□ -1.24
Sox1P53783 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC7.3□□□□□ -1.24
Sox1P53783 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 Gm25363-201ENSMUST00000158850 245 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Sox1P53783 Gm26505-201ENSMUST00000176208 166 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC7.3□□□□□ -1.24
Sox1P53783 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC7.3□□□□□ -1.24
Sox1P53783 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC7.3□□□□□ -1.24
Sox1P53783 Gm28507-201ENSMUST00000189737 703 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC7.3□□□□□ -1.24
Sox1P53783 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC7.3□□□□□ -1.24
Sox1P53783 Gm8929-201ENSMUST00000197781 1132 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Gm43576-201ENSMUST00000197937 871 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Trav15d-3-201ENSMUST00000198604 167 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 Gm43810-201ENSMUST00000201018 232 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 Gm18855-201ENSMUST00000206689 570 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Gm18877-201ENSMUST00000207706 539 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Gm4548-201ENSMUST00000208487 509 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC7.3□□□□□ -1.24
Sox1P53783 Gm5338-201ENSMUST00000209530 639 ntBASIC7.3□□□□□ -1.24
Sox1P53783 AL590614.1-201ENSMUST00000226037 268 ntBASIC7.3□□□□□ -1.24
Sox1P53783 AC122393.1-201ENSMUST00000226570 319 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Sox1P53783 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
Sox1P53783 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Sox1P53783 Gm26442-201ENSMUST00000082588 153 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Mir134-201ENSMUST00000083492 71 ntBASIC7.3□□□□□ -1.24
Sox1P53783 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Sox1P53783 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Sox1P53783 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Sox1P53783 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Sox1P53783 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
Sox1P53783 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Sox1P53783 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Sox1P53783 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Sox1P53783 Gm20749-201ENSMUST00000186319 3492 ntBASIC7.29□□□□□ -1.24
Sox1P53783 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Gm20679-201ENSMUST00000177285 1402 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Sox1P53783 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Dennd6a-204ENSMUST00000224248 2775 ntBASIC7.29□□□□□ -1.24
Sox1P53783 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC7.29□□□□□ -1.24
Sox1P53783 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Gulp1-201ENSMUST00000074525 3138 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Gm6493-201ENSMUST00000159889 1786 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Sox1P53783 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Gm14865-201ENSMUST00000117523 494 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Gm13890-201ENSMUST00000117578 390 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Gm12889-201ENSMUST00000118684 241 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Defa-ps1-201ENSMUST00000119062 282 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Gm13484-201ENSMUST00000120738 412 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Defa-ps6-201ENSMUST00000122172 282 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC7.29□□□□□ -1.24
Sox1P53783 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC7.29□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms