Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.76□□□□□ -1.33
Chmp6P0C0A3 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 AC155710.1-201ENSMUST00000219913 1353 ntBASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Gm24272-201ENSMUST00000102329 98 ntBASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Mir1900-201ENSMUST00000122714 78 ntBASIC6.75□□□□□ -1.33
Chmp6P0C0A3 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Gm37191-201ENSMUST00000193346 388 ntBASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Gm8869-201ENSMUST00000195222 947 ntBASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Gm3321-201ENSMUST00000200603 1129 ntBASIC6.75□□□□□ -1.33
Chmp6P0C0A3 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.75□□□□□ -1.33
Chmp6P0C0A3 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.75□□□□□ -1.33
Chmp6P0C0A3 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.75□□□□□ -1.33
Chmp6P0C0A3 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Chmp6P0C0A3 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Gm43719-201ENSMUST00000200088 2199 ntBASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Gm13626-201ENSMUST00000119435 402 ntBASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Gm14054-201ENSMUST00000120744 704 ntBASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Gm13642-201ENSMUST00000121697 381 ntBASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Gm12438-201ENSMUST00000122034 336 ntBASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Gm25374-201ENSMUST00000158158 101 ntBASIC6.74□□□□□ -1.33
Chmp6P0C0A3 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.74□□□□□ -1.33
Chmp6P0C0A3 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Gm37511-201ENSMUST00000192901 294 ntBASIC6.74□□□□□ -1.33
Chmp6P0C0A3 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC6.74□□□□□ -1.33
Chmp6P0C0A3 AC147782.1-201ENSMUST00000219169 475 ntBASIC6.74□□□□□ -1.33
Chmp6P0C0A3 AC154219.1-201ENSMUST00000220764 1262 ntBASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Gm6990-201ENSMUST00000086830 348 ntBASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 AC120347.1-201ENSMUST00000223326 1639 ntBASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms