Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
NpcdF8VQB8 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
NpcdF8VQB8 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
NpcdF8VQB8 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Gm37114-201ENSMUST00000195065 1804 ntBASIC8.27□□□□□ -1.09
NpcdF8VQB8 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC8.27□□□□□ -1.09
NpcdF8VQB8 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Gm8424-201ENSMUST00000117716 988 ntBASIC8.27□□□□□ -1.09
NpcdF8VQB8 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC8.27□□□□□ -1.09
NpcdF8VQB8 Gm8858-201ENSMUST00000118259 342 ntBASIC8.27□□□□□ -1.09
NpcdF8VQB8 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC8.27□□□□□ -1.09
NpcdF8VQB8 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NpcdF8VQB8 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC8.27□□□□□ -1.09
NpcdF8VQB8 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Gm37000-201ENSMUST00000193058 428 ntBASIC8.27□□□□□ -1.09
NpcdF8VQB8 Gm37328-201ENSMUST00000193191 640 ntBASIC8.27□□□□□ -1.09
NpcdF8VQB8 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Gm19035-202ENSMUST00000194575 959 ntBASIC8.27□□□□□ -1.09
NpcdF8VQB8 Gm43245-201ENSMUST00000197603 468 ntBASIC8.27□□□□□ -1.09
NpcdF8VQB8 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC8.27□□□□□ -1.09
NpcdF8VQB8 Gm44353-201ENSMUST00000200618 138 ntBASIC8.27□□□□□ -1.09
NpcdF8VQB8 Gm5154-201ENSMUST00000203971 399 ntBASIC8.27□□□□□ -1.09
NpcdF8VQB8 AC122034.1-201ENSMUST00000227641 595 ntBASIC8.27□□□□□ -1.09
NpcdF8VQB8 Gm6195-201ENSMUST00000063059 357 ntBASIC8.27□□□□□ -1.09
NpcdF8VQB8 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC8.27□□□□□ -1.09
NpcdF8VQB8 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
NpcdF8VQB8 AC124581.3-201ENSMUST00000224270 1624 ntBASIC8.27□□□□□ -1.09
NpcdF8VQB8 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
NpcdF8VQB8 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm24434-201ENSMUST00000104081 132 ntBASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm15971-201ENSMUST00000119372 211 ntBASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm15502-201ENSMUST00000121449 208 ntBASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm12005-201ENSMUST00000121451 379 ntBASIC8.26□□□□□ -1.09
NpcdF8VQB8 Rps29-ps-201ENSMUST00000122083 172 ntBASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm24719-201ENSMUST00000157520 110 ntBASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm23587-201ENSMUST00000157658 84 ntBASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm23030-201ENSMUST00000158004 273 ntBASIC8.26□□□□□ -1.09
NpcdF8VQB8 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm27864-201ENSMUST00000183704 190 ntBASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm38166-201ENSMUST00000191660 471 ntBASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm9931-201ENSMUST00000193584 1185 ntBASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm43390-201ENSMUST00000196614 421 ntBASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm9023-201ENSMUST00000198408 1038 ntBASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm44943-201ENSMUST00000207254 300 ntBASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm46103-201ENSMUST00000217614 341 ntBASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC8.26□□□□□ -1.09
NpcdF8VQB8 n-R5s97-201ENSMUST00000082585 113 ntBASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm26163-201ENSMUST00000083792 178 ntBASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC8.26□□□□□ -1.09
NpcdF8VQB8 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC8.26□□□□□ -1.09
NpcdF8VQB8 Gm28583-201ENSMUST00000188903 2141 ntBASIC8.26□□□□□ -1.09
NpcdF8VQB8 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NpcdF8VQB8 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms