Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Mir683-2-201ENSMUST00000102099 109 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Mir678-201ENSMUST00000102114 84 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm14016-201ENSMUST00000119095 486 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm12222-201ENSMUST00000121368 260 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm13440-201ENSMUST00000121665 496 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm15116-201ENSMUST00000122248 663 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Mup-ps4-201ENSMUST00000151005 539 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm23891-201ENSMUST00000158114 138 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm3208-201ENSMUST00000168281 427 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Mir683-1-201ENSMUST00000179371 109 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Mir7011-201ENSMUST00000183768 73 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm37088-201ENSMUST00000193887 406 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm43590-201ENSMUST00000195987 387 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Amd-ps5-201ENSMUST00000198406 989 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm2505-201ENSMUST00000200413 825 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm43226-201ENSMUST00000202438 259 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm19764-201ENSMUST00000203630 649 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm21054-201ENSMUST00000203981 380 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm44919-201ENSMUST00000208587 1073 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 AL772265.1-201ENSMUST00000214379 305 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm6581-201ENSMUST00000214545 260 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm7392-201ENSMUST00000217815 345 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 AC161374.1-201ENSMUST00000224191 794 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 AV026068-229ENSMUST00000225516 595 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 AC154724.1-201ENSMUST00000225782 821 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 AC131068.1-201ENSMUST00000226891 482 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 AC107453.2-201ENSMUST00000227714 655 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Olfr878-201ENSMUST00000086061 1065 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gm37460-201ENSMUST00000191796 2249 ntBASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Pcdh1F7BJK1 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm37124-201ENSMUST00000192140 1992 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 161.4 ms