Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm43098-201ENSMUST00000199989 1297 ntBASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm42799-201ENSMUST00000201331 328 ntBASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm44184-201ENSMUST00000204290 132 ntBASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm19900-201ENSMUST00000207285 576 ntBASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.24□□□□□ -1.57
Col6a4A2AX52 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.24□□□□□ -1.57
Col6a4A2AX52 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm43181-201ENSMUST00000197001 2072 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm38322-201ENSMUST00000194074 2300 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm45174-201ENSMUST00000208884 3065 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm13222-201ENSMUST00000119638 138 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm13537-201ENSMUST00000120467 267 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm12808-201ENSMUST00000120597 404 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Mir3080-201ENSMUST00000175010 79 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Mirt2-201ENSMUST00000175179 285 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm22932-201ENSMUST00000175510 72 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm27006-201ENSMUST00000182218 943 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm44432-201ENSMUST00000203342 938 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm18422-201ENSMUST00000203663 1032 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm17997-201ENSMUST00000211801 840 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Wnk1-218ENSMUST00000161512 1426 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm14836-201ENSMUST00000118567 471 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm14294-201ENSMUST00000119749 751 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm22312-201ENSMUST00000158005 130 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm21728-201ENSMUST00000188442 695 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm21889-201ENSMUST00000188487 695 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm20932-201ENSMUST00000189115 694 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm21920-201ENSMUST00000190042 695 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 AC153937.1-201ENSMUST00000218734 412 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 AC113198.1-201ENSMUST00000226353 832 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.23□□□□□ -1.57
Col6a4A2AX52 Gm44046-201ENSMUST00000203145 2678 ntBASIC5.23□□□□□ -1.57
Col6a4A2AX52 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a4A2AX52 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms