Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Cldn9Q9Z0S7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn9Q9Z0S7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cldn9Q9Z0S7 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.39■□□□□ 0.37
Cldn9Q9Z0S7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn9Q9Z0S7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cldn9Q9Z0S7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn9Q9Z0S7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cldn9Q9Z0S7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn9Q9Z0S7 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.39■□□□□ 0.37
Cldn9Q9Z0S7 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.39■□□□□ 0.37
Cldn9Q9Z0S7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cldn9Q9Z0S7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Cldn9Q9Z0S7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn9Q9Z0S7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn9Q9Z0S7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cldn9Q9Z0S7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn9Q9Z0S7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn9Q9Z0S7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn9Q9Z0S7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn9Q9Z0S7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Cldn9Q9Z0S7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cldn9Q9Z0S7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.38■□□□□ 0.37
Cldn9Q9Z0S7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn9Q9Z0S7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn9Q9Z0S7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cldn9Q9Z0S7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn9Q9Z0S7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn9Q9Z0S7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn9Q9Z0S7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cldn9Q9Z0S7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn9Q9Z0S7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn9Q9Z0S7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn9Q9Z0S7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn9Q9Z0S7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Cldn9Q9Z0S7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn9Q9Z0S7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.37■□□□□ 0.37
Cldn9Q9Z0S7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn9Q9Z0S7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn9Q9Z0S7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn9Q9Z0S7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn9Q9Z0S7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn9Q9Z0S7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn9Q9Z0S7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn9Q9Z0S7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn9Q9Z0S7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn9Q9Z0S7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn9Q9Z0S7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn9Q9Z0S7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn9Q9Z0S7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn9Q9Z0S7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.36■□□□□ 0.37
Cldn9Q9Z0S7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cldn9Q9Z0S7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn9Q9Z0S7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn9Q9Z0S7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn9Q9Z0S7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn9Q9Z0S7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn9Q9Z0S7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn9Q9Z0S7 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.36■□□□□ 0.37
Cldn9Q9Z0S7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cldn9Q9Z0S7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn9Q9Z0S7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Cldn9Q9Z0S7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn9Q9Z0S7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn9Q9Z0S7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn9Q9Z0S7 Gm6211-202ENSMUST00000167849 925 ntBASIC17.35■□□□□ 0.37
Cldn9Q9Z0S7 Gm27405-201ENSMUST00000184201 112 ntBASIC17.35■□□□□ 0.37
Cldn9Q9Z0S7 Gm7291-201ENSMUST00000199147 382 ntBASIC17.35■□□□□ 0.37
Cldn9Q9Z0S7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.35■□□□□ 0.37
Cldn9Q9Z0S7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn9Q9Z0S7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn9Q9Z0S7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cldn9Q9Z0S7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn9Q9Z0S7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn9Q9Z0S7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn9Q9Z0S7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn9Q9Z0S7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.35■□□□□ 0.37
Cldn9Q9Z0S7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn9Q9Z0S7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.34■□□□□ 0.37
Cldn9Q9Z0S7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn9Q9Z0S7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn9Q9Z0S7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn9Q9Z0S7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Cldn9Q9Z0S7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn9Q9Z0S7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn9Q9Z0S7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn9Q9Z0S7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn9Q9Z0S7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn9Q9Z0S7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn9Q9Z0S7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cldn9Q9Z0S7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn9Q9Z0S7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn9Q9Z0S7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.34■□□□□ 0.37
Cldn9Q9Z0S7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn9Q9Z0S7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldn9Q9Z0S7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldn9Q9Z0S7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cldn9Q9Z0S7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn9Q9Z0S7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cldn9Q9Z0S7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms