Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ap4s1Q9WVL1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ap4s1Q9WVL1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ap4s1Q9WVL1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ap4s1Q9WVL1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ap4s1Q9WVL1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.32■□□□□ 0.36
Ap4s1Q9WVL1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ap4s1Q9WVL1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ap4s1Q9WVL1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.32■□□□□ 0.36
Ap4s1Q9WVL1 Tgds-204ENSMUST00000228543 1594 ntBASIC17.32■□□□□ 0.36
Ap4s1Q9WVL1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Ap4s1Q9WVL1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ap4s1Q9WVL1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ap4s1Q9WVL1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ap4s1Q9WVL1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ap4s1Q9WVL1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ap4s1Q9WVL1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ap4s1Q9WVL1 Golgb1-201ENSMUST00000023534 498 ntBASIC17.3■□□□□ 0.36
Ap4s1Q9WVL1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ap4s1Q9WVL1 Gm9959-201ENSMUST00000068277 390 ntBASIC17.3■□□□□ 0.36
Ap4s1Q9WVL1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ap4s1Q9WVL1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ap4s1Q9WVL1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ap4s1Q9WVL1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ap4s1Q9WVL1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ap4s1Q9WVL1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ap4s1Q9WVL1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ap4s1Q9WVL1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ap4s1Q9WVL1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ap4s1Q9WVL1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ap4s1Q9WVL1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ap4s1Q9WVL1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ap4s1Q9WVL1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ap4s1Q9WVL1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ap4s1Q9WVL1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ap4s1Q9WVL1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ap4s1Q9WVL1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ap4s1Q9WVL1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.29■□□□□ 0.36
Ap4s1Q9WVL1 Spcs1-204ENSMUST00000226782 949 ntBASIC17.29■□□□□ 0.36
Ap4s1Q9WVL1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ap4s1Q9WVL1 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.29■□□□□ 0.36
Ap4s1Q9WVL1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ap4s1Q9WVL1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ap4s1Q9WVL1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ap4s1Q9WVL1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ap4s1Q9WVL1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ap4s1Q9WVL1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ap4s1Q9WVL1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.28■□□□□ 0.36
Ap4s1Q9WVL1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ap4s1Q9WVL1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ap4s1Q9WVL1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ap4s1Q9WVL1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ap4s1Q9WVL1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.28■□□□□ 0.36
Ap4s1Q9WVL1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ap4s1Q9WVL1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.28■□□□□ 0.36
Ap4s1Q9WVL1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ap4s1Q9WVL1 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.28■□□□□ 0.36
Ap4s1Q9WVL1 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.28■□□□□ 0.36
Ap4s1Q9WVL1 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.28■□□□□ 0.36
Ap4s1Q9WVL1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ap4s1Q9WVL1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ap4s1Q9WVL1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ap4s1Q9WVL1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ap4s1Q9WVL1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
Ap4s1Q9WVL1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ap4s1Q9WVL1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ap4s1Q9WVL1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ap4s1Q9WVL1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ap4s1Q9WVL1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ap4s1Q9WVL1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ap4s1Q9WVL1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ap4s1Q9WVL1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ap4s1Q9WVL1 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.27■□□□□ 0.36
Ap4s1Q9WVL1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.27■□□□□ 0.36
Ap4s1Q9WVL1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ap4s1Q9WVL1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms