Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.88■□□□□ 0.29
Lhx6Q9R1R0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Lhx6Q9R1R0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.87■□□□□ 0.29
Lhx6Q9R1R0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx6Q9R1R0 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.87■□□□□ 0.29
Lhx6Q9R1R0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Lhx6Q9R1R0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
Lhx6Q9R1R0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx6Q9R1R0 Gm14913-201ENSMUST00000120011 1093 ntBASIC16.87■□□□□ 0.29
Lhx6Q9R1R0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx6Q9R1R0 Gm44549-201ENSMUST00000208351 577 ntBASIC16.87■□□□□ 0.29
Lhx6Q9R1R0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Lhx6Q9R1R0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx6Q9R1R0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx6Q9R1R0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Lhx6Q9R1R0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx6Q9R1R0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx6Q9R1R0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx6Q9R1R0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx6Q9R1R0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.86■□□□□ 0.29
Lhx6Q9R1R0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Lhx6Q9R1R0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx6Q9R1R0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx6Q9R1R0 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Lhx6Q9R1R0 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Lhx6Q9R1R0 Gm17872-201ENSMUST00000222550 532 ntBASIC16.86■□□□□ 0.29
Lhx6Q9R1R0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx6Q9R1R0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx6Q9R1R0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx6Q9R1R0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx6Q9R1R0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx6Q9R1R0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Lhx6Q9R1R0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx6Q9R1R0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx6Q9R1R0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Lhx6Q9R1R0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx6Q9R1R0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lhx6Q9R1R0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 Gm11539-201ENSMUST00000119837 557 ntBASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 Gm13436-201ENSMUST00000120418 567 ntBASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lhx6Q9R1R0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx6Q9R1R0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx6Q9R1R0 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.84■□□□□ 0.29
Lhx6Q9R1R0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx6Q9R1R0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.84■□□□□ 0.29
Lhx6Q9R1R0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.84■□□□□ 0.29
Lhx6Q9R1R0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx6Q9R1R0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx6Q9R1R0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.84■□□□□ 0.29
Lhx6Q9R1R0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx6Q9R1R0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.84■□□□□ 0.29
Lhx6Q9R1R0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx6Q9R1R0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx6Q9R1R0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lhx6Q9R1R0 Rarb-207ENSMUST00000225921 2756 ntBASIC16.83■□□□□ 0.29
Lhx6Q9R1R0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lhx6Q9R1R0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.83■□□□□ 0.28
Lhx6Q9R1R0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.83■□□□□ 0.28
Lhx6Q9R1R0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx6Q9R1R0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.83■□□□□ 0.28
Lhx6Q9R1R0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx6Q9R1R0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx6Q9R1R0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx6Q9R1R0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx6Q9R1R0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.83■□□□□ 0.28
Lhx6Q9R1R0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx6Q9R1R0 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.83■□□□□ 0.28
Lhx6Q9R1R0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx6Q9R1R0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx6Q9R1R0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx6Q9R1R0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx6Q9R1R0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx6Q9R1R0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Lhx6Q9R1R0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx6Q9R1R0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx6Q9R1R0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx6Q9R1R0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx6Q9R1R0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx6Q9R1R0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Lhx6Q9R1R0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms