Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.6■□□□□ 0.41
Cdh17Q9R100 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh17Q9R100 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Cdh17Q9R100 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh17Q9R100 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh17Q9R100 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh17Q9R100 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh17Q9R100 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh17Q9R100 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh17Q9R100 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.59■□□□□ 0.41
Cdh17Q9R100 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.59■□□□□ 0.41
Cdh17Q9R100 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh17Q9R100 Gm8969-201ENSMUST00000199694 526 ntBASIC17.59■□□□□ 0.41
Cdh17Q9R100 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.59■□□□□ 0.41
Cdh17Q9R100 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh17Q9R100 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.59■□□□□ 0.41
Cdh17Q9R100 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh17Q9R100 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh17Q9R100 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh17Q9R100 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh17Q9R100 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh17Q9R100 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdh17Q9R100 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdh17Q9R100 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdh17Q9R100 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Cdh17Q9R100 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Cdh17Q9R100 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh17Q9R100 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh17Q9R100 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh17Q9R100 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cdh17Q9R100 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cdh17Q9R100 Gm18671-201ENSMUST00000214826 683 ntBASIC17.58■□□□□ 0.4
Cdh17Q9R100 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh17Q9R100 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh17Q9R100 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh17Q9R100 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh17Q9R100 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cdh17Q9R100 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.57■□□□□ 0.4
Cdh17Q9R100 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cdh17Q9R100 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh17Q9R100 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh17Q9R100 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cdh17Q9R100 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.57■□□□□ 0.4
Cdh17Q9R100 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.57■□□□□ 0.4
Cdh17Q9R100 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cdh17Q9R100 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh17Q9R100 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh17Q9R100 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh17Q9R100 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh17Q9R100 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh17Q9R100 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
Cdh17Q9R100 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh17Q9R100 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh17Q9R100 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh17Q9R100 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh17Q9R100 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.56■□□□□ 0.4
Cdh17Q9R100 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh17Q9R100 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.56■□□□□ 0.4
Cdh17Q9R100 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.56■□□□□ 0.4
Cdh17Q9R100 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Cdh17Q9R100 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh17Q9R100 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh17Q9R100 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh17Q9R100 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cdh17Q9R100 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh17Q9R100 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh17Q9R100 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh17Q9R100 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh17Q9R100 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh17Q9R100 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh17Q9R100 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.55■□□□□ 0.4
Cdh17Q9R100 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh17Q9R100 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.55■□□□□ 0.4
Cdh17Q9R100 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh17Q9R100 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.55■□□□□ 0.4
Cdh17Q9R100 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh17Q9R100 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh17Q9R100 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.55■□□□□ 0.4
Cdh17Q9R100 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh17Q9R100 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh17Q9R100 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.55■□□□□ 0.4
Cdh17Q9R100 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh17Q9R100 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Cdh17Q9R100 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh17Q9R100 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
Cdh17Q9R100 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh17Q9R100 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh17Q9R100 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh17Q9R100 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Cdh17Q9R100 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh17Q9R100 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh17Q9R100 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh17Q9R100 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cdh17Q9R100 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh17Q9R100 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Cdh17Q9R100 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh17Q9R100 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh17Q9R100 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh17Q9R100 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh17Q9R100 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms