Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shroom3Q9QXN0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shroom3Q9QXN0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Shroom3Q9QXN0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shroom3Q9QXN0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Shroom3Q9QXN0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shroom3Q9QXN0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shroom3Q9QXN0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shroom3Q9QXN0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Shroom3Q9QXN0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shroom3Q9QXN0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Shroom3Q9QXN0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Shroom3Q9QXN0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shroom3Q9QXN0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.12■□□□□ 0.49
Shroom3Q9QXN0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Shroom3Q9QXN0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shroom3Q9QXN0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shroom3Q9QXN0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.12■□□□□ 0.49
Shroom3Q9QXN0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Shroom3Q9QXN0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shroom3Q9QXN0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shroom3Q9QXN0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
Shroom3Q9QXN0 Gm2559-201ENSMUST00000201323 363 ntBASIC18.11■□□□□ 0.49
Shroom3Q9QXN0 Zfp783-201ENSMUST00000095946 670 ntBASIC18.11■□□□□ 0.49
Shroom3Q9QXN0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom3Q9QXN0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom3Q9QXN0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom3Q9QXN0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom3Q9QXN0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom3Q9QXN0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom3Q9QXN0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom3Q9QXN0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.11■□□□□ 0.49
Shroom3Q9QXN0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.11■□□□□ 0.49
Shroom3Q9QXN0 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.11■□□□□ 0.49
Shroom3Q9QXN0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom3Q9QXN0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom3Q9QXN0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom3Q9QXN0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom3Q9QXN0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom3Q9QXN0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shroom3Q9QXN0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 Gm7977-201ENSMUST00000193787 748 ntBASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shroom3Q9QXN0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Rarb-207ENSMUST00000225921 2756 ntBASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Gm44549-201ENSMUST00000208351 577 ntBASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom3Q9QXN0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Shroom3Q9QXN0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Shroom3Q9QXN0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Shroom3Q9QXN0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Shroom3Q9QXN0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Shroom3Q9QXN0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.08■□□□□ 0.49
Shroom3Q9QXN0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Shroom3Q9QXN0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Shroom3Q9QXN0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Shroom3Q9QXN0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Shroom3Q9QXN0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Shroom3Q9QXN0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Shroom3Q9QXN0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms