Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rfx5Q9JL61 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx5Q9JL61 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx5Q9JL61 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx5Q9JL61 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx5Q9JL61 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx5Q9JL61 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx5Q9JL61 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx5Q9JL61 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.1■□□□□ 0.65
Rfx5Q9JL61 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx5Q9JL61 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx5Q9JL61 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx5Q9JL61 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.1■□□□□ 0.65
Rfx5Q9JL61 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx5Q9JL61 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx5Q9JL61 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx5Q9JL61 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.09■□□□□ 0.65
Rfx5Q9JL61 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.09■□□□□ 0.65
Rfx5Q9JL61 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rfx5Q9JL61 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.09■□□□□ 0.65
Rfx5Q9JL61 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.09■□□□□ 0.65
Rfx5Q9JL61 Mir2861-201ENSMUST00000175539 82 ntBASIC19.09■□□□□ 0.65
Rfx5Q9JL61 Gm10138-203ENSMUST00000206952 366 ntBASIC19.09■□□□□ 0.65
Rfx5Q9JL61 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx5Q9JL61 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.09■□□□□ 0.65
Rfx5Q9JL61 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx5Q9JL61 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx5Q9JL61 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx5Q9JL61 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx5Q9JL61 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.09■□□□□ 0.65
Rfx5Q9JL61 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx5Q9JL61 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx5Q9JL61 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Rfx5Q9JL61 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.08■□□□□ 0.65
Rfx5Q9JL61 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rfx5Q9JL61 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rfx5Q9JL61 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx5Q9JL61 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Rfx5Q9JL61 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.08■□□□□ 0.64
Rfx5Q9JL61 Gm10698-201ENSMUST00000182663 604 ntBASIC19.08■□□□□ 0.64
Rfx5Q9JL61 Gm8520-201ENSMUST00000186517 868 ntBASIC19.08■□□□□ 0.64
Rfx5Q9JL61 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.08■□□□□ 0.64
Rfx5Q9JL61 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx5Q9JL61 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
Rfx5Q9JL61 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx5Q9JL61 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx5Q9JL61 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.08■□□□□ 0.64
Rfx5Q9JL61 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx5Q9JL61 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx5Q9JL61 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx5Q9JL61 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Rfx5Q9JL61 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx5Q9JL61 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.07■□□□□ 0.64
Rfx5Q9JL61 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx5Q9JL61 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx5Q9JL61 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx5Q9JL61 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx5Q9JL61 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx5Q9JL61 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.07■□□□□ 0.64
Rfx5Q9JL61 Gm18666-201ENSMUST00000190039 958 ntBASIC19.07■□□□□ 0.64
Rfx5Q9JL61 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx5Q9JL61 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx5Q9JL61 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx5Q9JL61 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx5Q9JL61 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Rfx5Q9JL61 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.07■□□□□ 0.64
Rfx5Q9JL61 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx5Q9JL61 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Rfx5Q9JL61 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx5Q9JL61 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx5Q9JL61 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx5Q9JL61 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.06■□□□□ 0.64
Rfx5Q9JL61 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx5Q9JL61 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx5Q9JL61 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.06■□□□□ 0.64
Rfx5Q9JL61 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx5Q9JL61 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx5Q9JL61 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx5Q9JL61 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx5Q9JL61 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Rfx5Q9JL61 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx5Q9JL61 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx5Q9JL61 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx5Q9JL61 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.05■□□□□ 0.64
Rfx5Q9JL61 Gm15375-201ENSMUST00000119510 849 ntBASIC19.05■□□□□ 0.64
Rfx5Q9JL61 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx5Q9JL61 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.05■□□□□ 0.64
Rfx5Q9JL61 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx5Q9JL61 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx5Q9JL61 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx5Q9JL61 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx5Q9JL61 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx5Q9JL61 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx5Q9JL61 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Rfx5Q9JL61 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.04■□□□□ 0.64
Rfx5Q9JL61 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx5Q9JL61 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Rfx5Q9JL61 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx5Q9JL61 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.04■□□□□ 0.64
Rfx5Q9JL61 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms