Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn5aQ9JJV9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn5aQ9JJV9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.74■□□□□ 0.59
Scn5aQ9JJV9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn5aQ9JJV9 Gm33142-201ENSMUST00000193913 867 ntBASIC18.74■□□□□ 0.59
Scn5aQ9JJV9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn5aQ9JJV9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Scn5aQ9JJV9 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.74■□□□□ 0.59
Scn5aQ9JJV9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Scn5aQ9JJV9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn5aQ9JJV9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn5aQ9JJV9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Scn5aQ9JJV9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn5aQ9JJV9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scn5aQ9JJV9 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.73■□□□□ 0.59
Scn5aQ9JJV9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Scn5aQ9JJV9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn5aQ9JJV9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.73■□□□□ 0.59
Scn5aQ9JJV9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn5aQ9JJV9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn5aQ9JJV9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.73■□□□□ 0.59
Scn5aQ9JJV9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn5aQ9JJV9 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.73■□□□□ 0.59
Scn5aQ9JJV9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn5aQ9JJV9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn5aQ9JJV9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn5aQ9JJV9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn5aQ9JJV9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn5aQ9JJV9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn5aQ9JJV9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn5aQ9JJV9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scn5aQ9JJV9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn5aQ9JJV9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Scn5aQ9JJV9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn5aQ9JJV9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.72■□□□□ 0.59
Scn5aQ9JJV9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn5aQ9JJV9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scn5aQ9JJV9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Scn5aQ9JJV9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scn5aQ9JJV9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.71■□□□□ 0.59
Scn5aQ9JJV9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn5aQ9JJV9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Scn5aQ9JJV9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn5aQ9JJV9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn5aQ9JJV9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn5aQ9JJV9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn5aQ9JJV9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn5aQ9JJV9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn5aQ9JJV9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn5aQ9JJV9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Scn5aQ9JJV9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn5aQ9JJV9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn5aQ9JJV9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.7■□□□□ 0.58
Scn5aQ9JJV9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn5aQ9JJV9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn5aQ9JJV9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scn5aQ9JJV9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Scn5aQ9JJV9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scn5aQ9JJV9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn5aQ9JJV9 Ank2-226ENSMUST00000189368 339 ntBASIC18.69■□□□□ 0.58
Scn5aQ9JJV9 Gm18101-201ENSMUST00000215769 548 ntBASIC18.69■□□□□ 0.58
Scn5aQ9JJV9 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.69■□□□□ 0.58
Scn5aQ9JJV9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn5aQ9JJV9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn5aQ9JJV9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Scn5aQ9JJV9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.69■□□□□ 0.58
Scn5aQ9JJV9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn5aQ9JJV9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.69■□□□□ 0.58
Scn5aQ9JJV9 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.69■□□□□ 0.58
Scn5aQ9JJV9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Scn5aQ9JJV9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn5aQ9JJV9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Scn5aQ9JJV9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Scn5aQ9JJV9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.68■□□□□ 0.58
Scn5aQ9JJV9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn5aQ9JJV9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Scn5aQ9JJV9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn5aQ9JJV9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn5aQ9JJV9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.68■□□□□ 0.58
Scn5aQ9JJV9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn5aQ9JJV9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn5aQ9JJV9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn5aQ9JJV9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scn5aQ9JJV9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn5aQ9JJV9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn5aQ9JJV9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn5aQ9JJV9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.67■□□□□ 0.58
Scn5aQ9JJV9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scn5aQ9JJV9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn5aQ9JJV9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn5aQ9JJV9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn5aQ9JJV9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.66■□□□□ 0.58
Scn5aQ9JJV9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn5aQ9JJV9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn5aQ9JJV9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn5aQ9JJV9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Scn5aQ9JJV9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scn5aQ9JJV9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn5aQ9JJV9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn5aQ9JJV9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms