Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpf2Q9JJ80 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rpf2Q9JJ80 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rpf2Q9JJ80 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpf2Q9JJ80 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpf2Q9JJ80 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpf2Q9JJ80 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpf2Q9JJ80 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rpf2Q9JJ80 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpf2Q9JJ80 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rpf2Q9JJ80 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpf2Q9JJ80 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Rpf2Q9JJ80 Gm22325-201ENSMUST00000158904 308 ntBASIC19.21■□□□□ 0.67
Rpf2Q9JJ80 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.21■□□□□ 0.67
Rpf2Q9JJ80 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Rpf2Q9JJ80 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpf2Q9JJ80 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpf2Q9JJ80 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Rpf2Q9JJ80 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpf2Q9JJ80 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.21■□□□□ 0.67
Rpf2Q9JJ80 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpf2Q9JJ80 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpf2Q9JJ80 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rpf2Q9JJ80 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rpf2Q9JJ80 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpf2Q9JJ80 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpf2Q9JJ80 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpf2Q9JJ80 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rpf2Q9JJ80 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Rpf2Q9JJ80 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpf2Q9JJ80 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpf2Q9JJ80 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rpf2Q9JJ80 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpf2Q9JJ80 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.2■□□□□ 0.66
Rpf2Q9JJ80 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.2■□□□□ 0.66
Rpf2Q9JJ80 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpf2Q9JJ80 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.19■□□□□ 0.66
Rpf2Q9JJ80 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpf2Q9JJ80 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpf2Q9JJ80 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rpf2Q9JJ80 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpf2Q9JJ80 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpf2Q9JJ80 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpf2Q9JJ80 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.19■□□□□ 0.66
Rpf2Q9JJ80 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.19■□□□□ 0.66
Rpf2Q9JJ80 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rpf2Q9JJ80 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpf2Q9JJ80 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpf2Q9JJ80 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpf2Q9JJ80 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Rpf2Q9JJ80 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.19■□□□□ 0.66
Rpf2Q9JJ80 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rpf2Q9JJ80 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rpf2Q9JJ80 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpf2Q9JJ80 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rpf2Q9JJ80 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Rpf2Q9JJ80 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rpf2Q9JJ80 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpf2Q9JJ80 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Rpf2Q9JJ80 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpf2Q9JJ80 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpf2Q9JJ80 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpf2Q9JJ80 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rpf2Q9JJ80 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rpf2Q9JJ80 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rpf2Q9JJ80 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rpf2Q9JJ80 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rpf2Q9JJ80 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpf2Q9JJ80 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpf2Q9JJ80 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpf2Q9JJ80 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpf2Q9JJ80 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpf2Q9JJ80 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpf2Q9JJ80 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpf2Q9JJ80 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.18■□□□□ 0.66
Rpf2Q9JJ80 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpf2Q9JJ80 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Rpf2Q9JJ80 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpf2Q9JJ80 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpf2Q9JJ80 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rpf2Q9JJ80 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.17■□□□□ 0.66
Rpf2Q9JJ80 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.17■□□□□ 0.66
Rpf2Q9JJ80 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Rpf2Q9JJ80 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rpf2Q9JJ80 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpf2Q9JJ80 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpf2Q9JJ80 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.17■□□□□ 0.66
Rpf2Q9JJ80 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpf2Q9JJ80 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.17■□□□□ 0.66
Rpf2Q9JJ80 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Rpf2Q9JJ80 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.16■□□□□ 0.66
Rpf2Q9JJ80 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpf2Q9JJ80 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpf2Q9JJ80 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpf2Q9JJ80 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
Rpf2Q9JJ80 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.16■□□□□ 0.66
Rpf2Q9JJ80 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpf2Q9JJ80 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpf2Q9JJ80 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.16■□□□□ 0.66
Rpf2Q9JJ80 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms