Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim39Q9ESN2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim39Q9ESN2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trim39Q9ESN2 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.84■□□□□ 0.29
Trim39Q9ESN2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trim39Q9ESN2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.84■□□□□ 0.29
Trim39Q9ESN2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim39Q9ESN2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim39Q9ESN2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim39Q9ESN2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trim39Q9ESN2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim39Q9ESN2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim39Q9ESN2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim39Q9ESN2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim39Q9ESN2 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.84■□□□□ 0.29
Trim39Q9ESN2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim39Q9ESN2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim39Q9ESN2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trim39Q9ESN2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim39Q9ESN2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim39Q9ESN2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Trim39Q9ESN2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim39Q9ESN2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim39Q9ESN2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim39Q9ESN2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim39Q9ESN2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Trim39Q9ESN2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim39Q9ESN2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim39Q9ESN2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim39Q9ESN2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim39Q9ESN2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim39Q9ESN2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim39Q9ESN2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Trim39Q9ESN2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim39Q9ESN2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim39Q9ESN2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.83■□□□□ 0.28
Trim39Q9ESN2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim39Q9ESN2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim39Q9ESN2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim39Q9ESN2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim39Q9ESN2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim39Q9ESN2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim39Q9ESN2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trim39Q9ESN2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim39Q9ESN2 Gm13146-201ENSMUST00000118508 780 ntBASIC16.82■□□□□ 0.28
Trim39Q9ESN2 Gm15039-201ENSMUST00000118914 875 ntBASIC16.82■□□□□ 0.28
Trim39Q9ESN2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim39Q9ESN2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim39Q9ESN2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim39Q9ESN2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim39Q9ESN2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim39Q9ESN2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim39Q9ESN2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim39Q9ESN2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim39Q9ESN2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim39Q9ESN2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trim39Q9ESN2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim39Q9ESN2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim39Q9ESN2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim39Q9ESN2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim39Q9ESN2 Gm18671-201ENSMUST00000214826 683 ntBASIC16.81■□□□□ 0.28
Trim39Q9ESN2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Trim39Q9ESN2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim39Q9ESN2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim39Q9ESN2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim39Q9ESN2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim39Q9ESN2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.81■□□□□ 0.28
Trim39Q9ESN2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim39Q9ESN2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim39Q9ESN2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim39Q9ESN2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim39Q9ESN2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim39Q9ESN2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim39Q9ESN2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim39Q9ESN2 BC021767-201ENSMUST00000126387 1716 ntBASIC16.8■□□□□ 0.28
Trim39Q9ESN2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim39Q9ESN2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.8■□□□□ 0.28
Trim39Q9ESN2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim39Q9ESN2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.8■□□□□ 0.28
Trim39Q9ESN2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim39Q9ESN2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trim39Q9ESN2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trim39Q9ESN2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Trim39Q9ESN2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim39Q9ESN2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim39Q9ESN2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim39Q9ESN2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim39Q9ESN2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.8■□□□□ 0.28
Trim39Q9ESN2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim39Q9ESN2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim39Q9ESN2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim39Q9ESN2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim39Q9ESN2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim39Q9ESN2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim39Q9ESN2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.79■□□□□ 0.28
Trim39Q9ESN2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.79■□□□□ 0.28
Trim39Q9ESN2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trim39Q9ESN2 Gm18284-201ENSMUST00000172604 624 ntBASIC16.79■□□□□ 0.28
Trim39Q9ESN2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim39Q9ESN2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms