Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube4bQ9ES00 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube4bQ9ES00 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube4bQ9ES00 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ube4bQ9ES00 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ube4bQ9ES00 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube4bQ9ES00 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Ube4bQ9ES00 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ube4bQ9ES00 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ube4bQ9ES00 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ube4bQ9ES00 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ube4bQ9ES00 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ube4bQ9ES00 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ube4bQ9ES00 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ube4bQ9ES00 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ube4bQ9ES00 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ube4bQ9ES00 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ube4bQ9ES00 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ube4bQ9ES00 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ube4bQ9ES00 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube4bQ9ES00 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube4bQ9ES00 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ube4bQ9ES00 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube4bQ9ES00 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ube4bQ9ES00 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube4bQ9ES00 Gm8969-201ENSMUST00000199694 526 ntBASIC17.35■□□□□ 0.37
Ube4bQ9ES00 Golgb1-201ENSMUST00000023534 498 ntBASIC17.35■□□□□ 0.37
Ube4bQ9ES00 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube4bQ9ES00 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube4bQ9ES00 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ube4bQ9ES00 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.35■□□□□ 0.37
Ube4bQ9ES00 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ube4bQ9ES00 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube4bQ9ES00 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube4bQ9ES00 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube4bQ9ES00 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ube4bQ9ES00 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.35■□□□□ 0.37
Ube4bQ9ES00 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube4bQ9ES00 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ube4bQ9ES00 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube4bQ9ES00 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube4bQ9ES00 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube4bQ9ES00 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.34■□□□□ 0.37
Ube4bQ9ES00 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ube4bQ9ES00 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube4bQ9ES00 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.34■□□□□ 0.37
Ube4bQ9ES00 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.34■□□□□ 0.37
Ube4bQ9ES00 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.34■□□□□ 0.37
Ube4bQ9ES00 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube4bQ9ES00 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.34■□□□□ 0.37
Ube4bQ9ES00 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube4bQ9ES00 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube4bQ9ES00 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ube4bQ9ES00 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ube4bQ9ES00 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube4bQ9ES00 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ube4bQ9ES00 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ube4bQ9ES00 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ube4bQ9ES00 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ube4bQ9ES00 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ube4bQ9ES00 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ube4bQ9ES00 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.33■□□□□ 0.37
Ube4bQ9ES00 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.33■□□□□ 0.36
Ube4bQ9ES00 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ube4bQ9ES00 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.33■□□□□ 0.36
Ube4bQ9ES00 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ube4bQ9ES00 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube4bQ9ES00 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.33■□□□□ 0.36
Ube4bQ9ES00 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.33■□□□□ 0.36
Ube4bQ9ES00 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube4bQ9ES00 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube4bQ9ES00 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ube4bQ9ES00 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube4bQ9ES00 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Ube4bQ9ES00 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube4bQ9ES00 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube4bQ9ES00 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube4bQ9ES00 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube4bQ9ES00 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube4bQ9ES00 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube4bQ9ES00 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4bQ9ES00 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ube4bQ9ES00 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4bQ9ES00 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4bQ9ES00 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.32■□□□□ 0.36
Ube4bQ9ES00 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4bQ9ES00 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4bQ9ES00 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4bQ9ES00 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4bQ9ES00 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4bQ9ES00 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4bQ9ES00 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4bQ9ES00 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4bQ9ES00 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4bQ9ES00 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4bQ9ES00 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ube4bQ9ES00 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ube4bQ9ES00 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.31■□□□□ 0.36
Ube4bQ9ES00 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4bQ9ES00 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms