Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm12441-201ENSMUST00000121806 588 ntBASIC17.94■□□□□ 0.46
Tubb3Q9ERD7 Gm5408-201ENSMUST00000197998 747 ntBASIC17.94■□□□□ 0.46
Tubb3Q9ERD7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubb3Q9ERD7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubb3Q9ERD7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubb3Q9ERD7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Tubb3Q9ERD7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubb3Q9ERD7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubb3Q9ERD7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubb3Q9ERD7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubb3Q9ERD7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubb3Q9ERD7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tubb3Q9ERD7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.93■□□□□ 0.46
Tubb3Q9ERD7 Gm13148-201ENSMUST00000118892 745 ntBASIC17.93■□□□□ 0.46
Tubb3Q9ERD7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Tubb3Q9ERD7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tubb3Q9ERD7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Tubb3Q9ERD7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tubb3Q9ERD7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tubb3Q9ERD7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tubb3Q9ERD7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tubb3Q9ERD7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tubb3Q9ERD7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubb3Q9ERD7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubb3Q9ERD7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubb3Q9ERD7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubb3Q9ERD7 Gm6211-202ENSMUST00000167849 925 ntBASIC17.92■□□□□ 0.46
Tubb3Q9ERD7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.92■□□□□ 0.46
Tubb3Q9ERD7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubb3Q9ERD7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Tubb3Q9ERD7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubb3Q9ERD7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Tubb3Q9ERD7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubb3Q9ERD7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubb3Q9ERD7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubb3Q9ERD7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubb3Q9ERD7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tubb3Q9ERD7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tubb3Q9ERD7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tubb3Q9ERD7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Tubb3Q9ERD7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
Tubb3Q9ERD7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.91■□□□□ 0.46
Tubb3Q9ERD7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.91■□□□□ 0.46
Tubb3Q9ERD7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tubb3Q9ERD7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.91■□□□□ 0.46
Tubb3Q9ERD7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tubb3Q9ERD7 Gm4968-201ENSMUST00000071458 858 ntBASIC17.91■□□□□ 0.46
Tubb3Q9ERD7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tubb3Q9ERD7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tubb3Q9ERD7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.91■□□□□ 0.46
Tubb3Q9ERD7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tubb3Q9ERD7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tubb3Q9ERD7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Tubb3Q9ERD7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tubb3Q9ERD7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tubb3Q9ERD7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tubb3Q9ERD7 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.9■□□□□ 0.46
Tubb3Q9ERD7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tubb3Q9ERD7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Tubb3Q9ERD7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tubb3Q9ERD7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tubb3Q9ERD7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.9■□□□□ 0.46
Tubb3Q9ERD7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tubb3Q9ERD7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Tubb3Q9ERD7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tubb3Q9ERD7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tubb3Q9ERD7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tubb3Q9ERD7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tubb3Q9ERD7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tubb3Q9ERD7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tubb3Q9ERD7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tubb3Q9ERD7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tubb3Q9ERD7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Tubb3Q9ERD7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tubb3Q9ERD7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Tubb3Q9ERD7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tubb3Q9ERD7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.89■□□□□ 0.45
Tubb3Q9ERD7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tubb3Q9ERD7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.89■□□□□ 0.45
Tubb3Q9ERD7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tubb3Q9ERD7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tubb3Q9ERD7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tubb3Q9ERD7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tubb3Q9ERD7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Tubb3Q9ERD7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tubb3Q9ERD7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tubb3Q9ERD7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tubb3Q9ERD7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tubb3Q9ERD7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tubb3Q9ERD7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.88■□□□□ 0.45
Tubb3Q9ERD7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tubb3Q9ERD7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.88■□□□□ 0.45
Tubb3Q9ERD7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tubb3Q9ERD7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tubb3Q9ERD7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tubb3Q9ERD7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tubb3Q9ERD7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tubb3Q9ERD7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tubb3Q9ERD7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tubb3Q9ERD7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms