Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rtp4Q9ER80 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.91■□□□□ 0.3
Rtp4Q9ER80 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.9■□□□□ 0.3
Rtp4Q9ER80 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rtp4Q9ER80 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtp4Q9ER80 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.9■□□□□ 0.3
Rtp4Q9ER80 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rtp4Q9ER80 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rtp4Q9ER80 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Rtp4Q9ER80 Gm10252-201ENSMUST00000209541 832 ntBASIC16.9■□□□□ 0.3
Rtp4Q9ER80 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtp4Q9ER80 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtp4Q9ER80 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rtp4Q9ER80 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtp4Q9ER80 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtp4Q9ER80 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtp4Q9ER80 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtp4Q9ER80 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rtp4Q9ER80 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.89■□□□□ 0.29
Rtp4Q9ER80 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.89■□□□□ 0.29
Rtp4Q9ER80 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtp4Q9ER80 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtp4Q9ER80 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtp4Q9ER80 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Rtp4Q9ER80 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtp4Q9ER80 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtp4Q9ER80 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rtp4Q9ER80 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.88■□□□□ 0.29
Rtp4Q9ER80 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.88■□□□□ 0.29
Rtp4Q9ER80 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Rtp4Q9ER80 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtp4Q9ER80 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtp4Q9ER80 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtp4Q9ER80 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtp4Q9ER80 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Rtp4Q9ER80 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtp4Q9ER80 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtp4Q9ER80 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtp4Q9ER80 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtp4Q9ER80 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtp4Q9ER80 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.87■□□□□ 0.29
Rtp4Q9ER80 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.87■□□□□ 0.29
Rtp4Q9ER80 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rtp4Q9ER80 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtp4Q9ER80 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.87■□□□□ 0.29
Rtp4Q9ER80 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtp4Q9ER80 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rtp4Q9ER80 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtp4Q9ER80 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtp4Q9ER80 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtp4Q9ER80 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.87■□□□□ 0.29
Rtp4Q9ER80 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtp4Q9ER80 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Rtp4Q9ER80 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rtp4Q9ER80 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rtp4Q9ER80 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.87■□□□□ 0.29
Rtp4Q9ER80 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtp4Q9ER80 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtp4Q9ER80 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtp4Q9ER80 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtp4Q9ER80 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtp4Q9ER80 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtp4Q9ER80 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtp4Q9ER80 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.86■□□□□ 0.29
Rtp4Q9ER80 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.86■□□□□ 0.29
Rtp4Q9ER80 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Rtp4Q9ER80 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtp4Q9ER80 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtp4Q9ER80 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtp4Q9ER80 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtp4Q9ER80 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtp4Q9ER80 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtp4Q9ER80 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rtp4Q9ER80 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtp4Q9ER80 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtp4Q9ER80 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtp4Q9ER80 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rtp4Q9ER80 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms