Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.07■□□□□ 0.48
Vps35Q9EQH3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps35Q9EQH3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps35Q9EQH3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vps35Q9EQH3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps35Q9EQH3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps35Q9EQH3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps35Q9EQH3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps35Q9EQH3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps35Q9EQH3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Vps35Q9EQH3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps35Q9EQH3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps35Q9EQH3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps35Q9EQH3 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.06■□□□□ 0.48
Vps35Q9EQH3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps35Q9EQH3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps35Q9EQH3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps35Q9EQH3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.06■□□□□ 0.48
Vps35Q9EQH3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps35Q9EQH3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.06■□□□□ 0.48
Vps35Q9EQH3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.06■□□□□ 0.48
Vps35Q9EQH3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps35Q9EQH3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Vps35Q9EQH3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps35Q9EQH3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps35Q9EQH3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vps35Q9EQH3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps35Q9EQH3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.06■□□□□ 0.48
Vps35Q9EQH3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps35Q9EQH3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps35Q9EQH3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps35Q9EQH3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps35Q9EQH3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.05■□□□□ 0.48
Vps35Q9EQH3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps35Q9EQH3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Vps35Q9EQH3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps35Q9EQH3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps35Q9EQH3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Vps35Q9EQH3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps35Q9EQH3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps35Q9EQH3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Vps35Q9EQH3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps35Q9EQH3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Vps35Q9EQH3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps35Q9EQH3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.04■□□□□ 0.48
Vps35Q9EQH3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps35Q9EQH3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.04■□□□□ 0.48
Vps35Q9EQH3 Gm44549-201ENSMUST00000208351 577 ntBASIC18.04■□□□□ 0.48
Vps35Q9EQH3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps35Q9EQH3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vps35Q9EQH3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vps35Q9EQH3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps35Q9EQH3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps35Q9EQH3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Vps35Q9EQH3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps35Q9EQH3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps35Q9EQH3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Vps35Q9EQH3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps35Q9EQH3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps35Q9EQH3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Vps35Q9EQH3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps35Q9EQH3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps35Q9EQH3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.03■□□□□ 0.48
Vps35Q9EQH3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Vps35Q9EQH3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Vps35Q9EQH3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.03■□□□□ 0.48
Vps35Q9EQH3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.03■□□□□ 0.48
Vps35Q9EQH3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps35Q9EQH3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps35Q9EQH3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Vps35Q9EQH3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Vps35Q9EQH3 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.03■□□□□ 0.48
Vps35Q9EQH3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps35Q9EQH3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps35Q9EQH3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Vps35Q9EQH3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps35Q9EQH3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.03■□□□□ 0.48
Vps35Q9EQH3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps35Q9EQH3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps35Q9EQH3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps35Q9EQH3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps35Q9EQH3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps35Q9EQH3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Vps35Q9EQH3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.02■□□□□ 0.48
Vps35Q9EQH3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Vps35Q9EQH3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.02■□□□□ 0.48
Vps35Q9EQH3 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.02■□□□□ 0.48
Vps35Q9EQH3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Vps35Q9EQH3 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.02■□□□□ 0.48
Vps35Q9EQH3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps35Q9EQH3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps35Q9EQH3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Vps35Q9EQH3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Vps35Q9EQH3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps35Q9EQH3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Vps35Q9EQH3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vps35Q9EQH3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.02■□□□□ 0.47
Vps35Q9EQH3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vps35Q9EQH3 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.02■□□□□ 0.47
Vps35Q9EQH3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms