Protein–RNA interactions for Protein: Q9D7J9

Echdc3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc3Q9D7J9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Echdc3Q9D7J9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Echdc3Q9D7J9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Echdc3Q9D7J9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Echdc3Q9D7J9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Echdc3Q9D7J9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Echdc3Q9D7J9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Echdc3Q9D7J9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.6■□□□□ 0.41
Echdc3Q9D7J9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Echdc3Q9D7J9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.6■□□□□ 0.41
Echdc3Q9D7J9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Echdc3Q9D7J9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Echdc3Q9D7J9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Echdc3Q9D7J9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Echdc3Q9D7J9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Echdc3Q9D7J9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Echdc3Q9D7J9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.59■□□□□ 0.41
Echdc3Q9D7J9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Echdc3Q9D7J9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Echdc3Q9D7J9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Echdc3Q9D7J9 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.59■□□□□ 0.41
Echdc3Q9D7J9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.59■□□□□ 0.41
Echdc3Q9D7J9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Echdc3Q9D7J9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Echdc3Q9D7J9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Echdc3Q9D7J9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Echdc3Q9D7J9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Echdc3Q9D7J9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Echdc3Q9D7J9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Echdc3Q9D7J9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Echdc3Q9D7J9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Echdc3Q9D7J9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Echdc3Q9D7J9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Echdc3Q9D7J9 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.58■□□□□ 0.41
Echdc3Q9D7J9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Echdc3Q9D7J9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Echdc3Q9D7J9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Echdc3Q9D7J9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.58■□□□□ 0.4
Echdc3Q9D7J9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.58■□□□□ 0.4
Echdc3Q9D7J9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Echdc3Q9D7J9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Echdc3Q9D7J9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Echdc3Q9D7J9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Echdc3Q9D7J9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Echdc3Q9D7J9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Echdc3Q9D7J9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Echdc3Q9D7J9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Echdc3Q9D7J9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Echdc3Q9D7J9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Echdc3Q9D7J9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Echdc3Q9D7J9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Echdc3Q9D7J9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Echdc3Q9D7J9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Echdc3Q9D7J9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.56■□□□□ 0.4
Echdc3Q9D7J9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
Echdc3Q9D7J9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Echdc3Q9D7J9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Echdc3Q9D7J9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Echdc3Q9D7J9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Echdc3Q9D7J9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Echdc3Q9D7J9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Echdc3Q9D7J9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Echdc3Q9D7J9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Echdc3Q9D7J9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Echdc3Q9D7J9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Echdc3Q9D7J9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Echdc3Q9D7J9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Echdc3Q9D7J9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Echdc3Q9D7J9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Echdc3Q9D7J9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Echdc3Q9D7J9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Echdc3Q9D7J9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.55■□□□□ 0.4
Echdc3Q9D7J9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Echdc3Q9D7J9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Echdc3Q9D7J9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Echdc3Q9D7J9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Echdc3Q9D7J9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Echdc3Q9D7J9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms