Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap3Q9D706 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap3Q9D706 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap3Q9D706 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap3Q9D706 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap3Q9D706 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap3Q9D706 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.91■□□□□ 0.78
Rpap3Q9D706 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap3Q9D706 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap3Q9D706 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap3Q9D706 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap3Q9D706 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap3Q9D706 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap3Q9D706 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Rpap3Q9D706 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap3Q9D706 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpap3Q9D706 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpap3Q9D706 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.9■□□□□ 0.78
Rpap3Q9D706 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Rpap3Q9D706 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.9■□□□□ 0.78
Rpap3Q9D706 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.9■□□□□ 0.78
Rpap3Q9D706 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpap3Q9D706 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpap3Q9D706 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpap3Q9D706 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rpap3Q9D706 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Rpap3Q9D706 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.89■□□□□ 0.77
Rpap3Q9D706 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.89■□□□□ 0.77
Rpap3Q9D706 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpap3Q9D706 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Rpap3Q9D706 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rpap3Q9D706 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.89■□□□□ 0.77
Rpap3Q9D706 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.89■□□□□ 0.77
Rpap3Q9D706 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpap3Q9D706 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.89■□□□□ 0.77
Rpap3Q9D706 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpap3Q9D706 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpap3Q9D706 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpap3Q9D706 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rpap3Q9D706 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Rpap3Q9D706 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpap3Q9D706 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpap3Q9D706 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Rpap3Q9D706 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpap3Q9D706 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Rpap3Q9D706 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpap3Q9D706 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpap3Q9D706 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.88■□□□□ 0.77
Rpap3Q9D706 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpap3Q9D706 Gm15565-201ENSMUST00000118890 427 ntBASIC19.88■□□□□ 0.77
Rpap3Q9D706 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.88■□□□□ 0.77
Rpap3Q9D706 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Rpap3Q9D706 Gm21814-202ENSMUST00000203277 873 ntBASIC19.88■□□□□ 0.77
Rpap3Q9D706 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpap3Q9D706 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpap3Q9D706 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpap3Q9D706 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpap3Q9D706 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpap3Q9D706 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpap3Q9D706 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpap3Q9D706 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpap3Q9D706 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpap3Q9D706 Tgds-204ENSMUST00000228543 1594 ntBASIC19.87■□□□□ 0.77
Rpap3Q9D706 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpap3Q9D706 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpap3Q9D706 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rpap3Q9D706 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.87■□□□□ 0.77
Rpap3Q9D706 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Rpap3Q9D706 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rpap3Q9D706 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpap3Q9D706 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.87■□□□□ 0.77
Rpap3Q9D706 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpap3Q9D706 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.87■□□□□ 0.77
Rpap3Q9D706 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.87■□□□□ 0.77
Rpap3Q9D706 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpap3Q9D706 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap3Q9D706 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Rpap3Q9D706 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap3Q9D706 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap3Q9D706 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap3Q9D706 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap3Q9D706 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap3Q9D706 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap3Q9D706 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap3Q9D706 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap3Q9D706 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap3Q9D706 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap3Q9D706 Gm11643-201ENSMUST00000119578 864 ntBASIC19.86■□□□□ 0.77
Rpap3Q9D706 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap3Q9D706 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap3Q9D706 Gm5417-201ENSMUST00000079706 384 ntBASIC19.86■□□□□ 0.77
Rpap3Q9D706 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap3Q9D706 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap3Q9D706 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.86■□□□□ 0.77
Rpap3Q9D706 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap3Q9D706 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rpap3Q9D706 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpap3Q9D706 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rpap3Q9D706 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.85■□□□□ 0.77
Rpap3Q9D706 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms