Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Gm5364-201ENSMUST00000216789 889 ntBASIC19.45■□□□□ 0.7
Lysmd1Q9D0E3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Lysmd1Q9D0E3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lysmd1Q9D0E3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lysmd1Q9D0E3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lysmd1Q9D0E3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lysmd1Q9D0E3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lysmd1Q9D0E3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lysmd1Q9D0E3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lysmd1Q9D0E3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lysmd1Q9D0E3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lysmd1Q9D0E3 Gm11779-201ENSMUST00000118541 368 ntBASIC19.44■□□□□ 0.7
Lysmd1Q9D0E3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.44■□□□□ 0.7
Lysmd1Q9D0E3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lysmd1Q9D0E3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lysmd1Q9D0E3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lysmd1Q9D0E3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Lysmd1Q9D0E3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lysmd1Q9D0E3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lysmd1Q9D0E3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd1Q9D0E3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd1Q9D0E3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd1Q9D0E3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd1Q9D0E3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Lysmd1Q9D0E3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Lysmd1Q9D0E3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.43■□□□□ 0.7
Lysmd1Q9D0E3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.43■□□□□ 0.7
Lysmd1Q9D0E3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
Lysmd1Q9D0E3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd1Q9D0E3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.43■□□□□ 0.7
Lysmd1Q9D0E3 Gm4974-201ENSMUST00000209974 875 ntBASIC19.43■□□□□ 0.7
Lysmd1Q9D0E3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd1Q9D0E3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd1Q9D0E3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd1Q9D0E3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Lysmd1Q9D0E3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd1Q9D0E3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lysmd1Q9D0E3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd1Q9D0E3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd1Q9D0E3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd1Q9D0E3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd1Q9D0E3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd1Q9D0E3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.42■□□□□ 0.7
Lysmd1Q9D0E3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd1Q9D0E3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd1Q9D0E3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd1Q9D0E3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd1Q9D0E3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.42■□□□□ 0.7
Lysmd1Q9D0E3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd1Q9D0E3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd1Q9D0E3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lysmd1Q9D0E3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd1Q9D0E3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd1Q9D0E3 Mir5131-201ENSMUST00000175426 93 ntBASIC19.41■□□□□ 0.7
Lysmd1Q9D0E3 Mir2861-201ENSMUST00000175539 82 ntBASIC19.41■□□□□ 0.7
Lysmd1Q9D0E3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Lysmd1Q9D0E3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.41■□□□□ 0.7
Lysmd1Q9D0E3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC19.41■□□□□ 0.7
Lysmd1Q9D0E3 Gm10175-201ENSMUST00000086013 645 ntBASIC19.41■□□□□ 0.7
Lysmd1Q9D0E3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd1Q9D0E3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lysmd1Q9D0E3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd1Q9D0E3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd1Q9D0E3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd1Q9D0E3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd1Q9D0E3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.4■□□□□ 0.7
Lysmd1Q9D0E3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Lysmd1Q9D0E3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.4■□□□□ 0.7
Lysmd1Q9D0E3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd1Q9D0E3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd1Q9D0E3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd1Q9D0E3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lysmd1Q9D0E3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd1Q9D0E3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.39■□□□□ 0.69
Lysmd1Q9D0E3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd1Q9D0E3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd1Q9D0E3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.39■□□□□ 0.69
Lysmd1Q9D0E3 Rps4l-201ENSMUST00000071745 943 ntBASIC19.39■□□□□ 0.69
Lysmd1Q9D0E3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.39■□□□□ 0.69
Lysmd1Q9D0E3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Lysmd1Q9D0E3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lysmd1Q9D0E3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd1Q9D0E3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19.38■□□□□ 0.69
Lysmd1Q9D0E3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Lysmd1Q9D0E3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd1Q9D0E3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.38■□□□□ 0.69
Lysmd1Q9D0E3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd1Q9D0E3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Lysmd1Q9D0E3 Gm37722-201ENSMUST00000193757 208 ntBASIC19.38■□□□□ 0.69
Lysmd1Q9D0E3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC19.38■□□□□ 0.69
Lysmd1Q9D0E3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lysmd1Q9D0E3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Lysmd1Q9D0E3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd1Q9D0E3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd1Q9D0E3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd1Q9D0E3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd1Q9D0E3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Lysmd1Q9D0E3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd1Q9D0E3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.37■□□□□ 0.69
Lysmd1Q9D0E3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms