Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc3Q9CW03 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smc3Q9CW03 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.24■□□□□ 0.99
Smc3Q9CW03 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smc3Q9CW03 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smc3Q9CW03 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smc3Q9CW03 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Smc3Q9CW03 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smc3Q9CW03 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smc3Q9CW03 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc3Q9CW03 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Smc3Q9CW03 Gm43702-201ENSMUST00000198772 2546 ntBASIC21.23■□□□□ 0.99
Smc3Q9CW03 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.23■□□□□ 0.99
Smc3Q9CW03 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.23■□□□□ 0.99
Smc3Q9CW03 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc3Q9CW03 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc3Q9CW03 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.23■□□□□ 0.99
Smc3Q9CW03 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Smc3Q9CW03 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc3Q9CW03 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc3Q9CW03 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc3Q9CW03 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Smc3Q9CW03 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc3Q9CW03 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc3Q9CW03 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc3Q9CW03 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc3Q9CW03 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Smc3Q9CW03 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc3Q9CW03 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc3Q9CW03 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Smc3Q9CW03 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc3Q9CW03 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc3Q9CW03 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc3Q9CW03 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc3Q9CW03 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc3Q9CW03 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.22■□□□□ 0.99
Smc3Q9CW03 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smc3Q9CW03 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc3Q9CW03 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc3Q9CW03 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smc3Q9CW03 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc3Q9CW03 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc3Q9CW03 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc3Q9CW03 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc3Q9CW03 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smc3Q9CW03 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smc3Q9CW03 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc3Q9CW03 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smc3Q9CW03 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc3Q9CW03 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc3Q9CW03 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smc3Q9CW03 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smc3Q9CW03 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc3Q9CW03 Gm6420-201ENSMUST00000193885 723 ntBASIC21.2■□□□□ 0.98
Smc3Q9CW03 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Smc3Q9CW03 Gm10493-201ENSMUST00000097270 612 ntBASIC21.2■□□□□ 0.98
Smc3Q9CW03 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smc3Q9CW03 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smc3Q9CW03 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc3Q9CW03 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc3Q9CW03 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smc3Q9CW03 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Smc3Q9CW03 Nespas-201ENSMUST00000143738 1083 ntBASIC21.19■□□□□ 0.98
Smc3Q9CW03 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.19■□□□□ 0.98
Smc3Q9CW03 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc3Q9CW03 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc3Q9CW03 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.19■□□□□ 0.98
Smc3Q9CW03 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc3Q9CW03 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC21.19■□□□□ 0.98
Smc3Q9CW03 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc3Q9CW03 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc3Q9CW03 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc3Q9CW03 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC21.19■□□□□ 0.98
Smc3Q9CW03 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc3Q9CW03 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Smc3Q9CW03 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Smc3Q9CW03 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.18■□□□□ 0.98
Smc3Q9CW03 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc3Q9CW03 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smc3Q9CW03 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.18■□□□□ 0.98
Smc3Q9CW03 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.18■□□□□ 0.98
Smc3Q9CW03 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.18■□□□□ 0.98
Smc3Q9CW03 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.18■□□□□ 0.98
Smc3Q9CW03 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc3Q9CW03 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc3Q9CW03 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smc3Q9CW03 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc3Q9CW03 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc3Q9CW03 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc3Q9CW03 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc3Q9CW03 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc3Q9CW03 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.17■□□□□ 0.98
Smc3Q9CW03 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc3Q9CW03 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Smc3Q9CW03 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Smc3Q9CW03 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smc3Q9CW03 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.17■□□□□ 0.98
Smc3Q9CW03 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc3Q9CW03 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smc3Q9CW03 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 192.3 ms