Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh23Q99PF4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh23Q99PF4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh23Q99PF4 Gm27525-201ENSMUST00000184465 107 ntBASIC18.53■□□□□ 0.56
Cdh23Q99PF4 Gm38285-201ENSMUST00000192928 922 ntBASIC18.53■□□□□ 0.56
Cdh23Q99PF4 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh23Q99PF4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Cdh23Q99PF4 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh23Q99PF4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh23Q99PF4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh23Q99PF4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh23Q99PF4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Cdh23Q99PF4 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.53■□□□□ 0.56
Cdh23Q99PF4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh23Q99PF4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Cdh23Q99PF4 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.52■□□□□ 0.56
Cdh23Q99PF4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh23Q99PF4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh23Q99PF4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh23Q99PF4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Cdh23Q99PF4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh23Q99PF4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.52■□□□□ 0.56
Cdh23Q99PF4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh23Q99PF4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Cdh23Q99PF4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdh23Q99PF4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cdh23Q99PF4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.51■□□□□ 0.55
Cdh23Q99PF4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.51■□□□□ 0.55
Cdh23Q99PF4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh23Q99PF4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.51■□□□□ 0.55
Cdh23Q99PF4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh23Q99PF4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.51■□□□□ 0.55
Cdh23Q99PF4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.51■□□□□ 0.55
Cdh23Q99PF4 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.51■□□□□ 0.55
Cdh23Q99PF4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.51■□□□□ 0.55
Cdh23Q99PF4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh23Q99PF4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh23Q99PF4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh23Q99PF4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh23Q99PF4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh23Q99PF4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh23Q99PF4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh23Q99PF4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh23Q99PF4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cdh23Q99PF4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Cdh23Q99PF4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Cdh23Q99PF4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Cdh23Q99PF4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Cdh23Q99PF4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.5■□□□□ 0.55
Cdh23Q99PF4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh23Q99PF4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh23Q99PF4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh23Q99PF4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cdh23Q99PF4 Mir3081-201ENSMUST00000175305 84 ntBASIC18.49■□□□□ 0.55
Cdh23Q99PF4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh23Q99PF4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh23Q99PF4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh23Q99PF4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh23Q99PF4 Gm18958-201ENSMUST00000174258 762 ntBASIC18.49■□□□□ 0.55
Cdh23Q99PF4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh23Q99PF4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh23Q99PF4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cdh23Q99PF4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh23Q99PF4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh23Q99PF4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh23Q99PF4 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.48■□□□□ 0.55
Cdh23Q99PF4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh23Q99PF4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.48■□□□□ 0.55
Cdh23Q99PF4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh23Q99PF4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh23Q99PF4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh23Q99PF4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh23Q99PF4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.47■□□□□ 0.55
Cdh23Q99PF4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh23Q99PF4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Cdh23Q99PF4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh23Q99PF4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.47■□□□□ 0.55
Cdh23Q99PF4 Gm17808-201ENSMUST00000200859 894 ntBASIC18.47■□□□□ 0.55
Cdh23Q99PF4 Gm7370-201ENSMUST00000219471 767 ntBASIC18.47■□□□□ 0.55
Cdh23Q99PF4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh23Q99PF4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.47■□□□□ 0.55
Cdh23Q99PF4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh23Q99PF4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh23Q99PF4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh23Q99PF4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh23Q99PF4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.47■□□□□ 0.55
Cdh23Q99PF4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh23Q99PF4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh23Q99PF4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Cdh23Q99PF4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh23Q99PF4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh23Q99PF4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh23Q99PF4 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.46■□□□□ 0.55
Cdh23Q99PF4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh23Q99PF4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh23Q99PF4 Gm16061-201ENSMUST00000122167 857 ntBASIC18.46■□□□□ 0.55
Cdh23Q99PF4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh23Q99PF4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.46■□□□□ 0.55
Cdh23Q99PF4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh23Q99PF4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms