Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkd1Q99MH6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkd1Q99MH6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkd1Q99MH6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nkd1Q99MH6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Nkd1Q99MH6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.08■□□□□ 0.32
Nkd1Q99MH6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nkd1Q99MH6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkd1Q99MH6 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkd1Q99MH6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Nkd1Q99MH6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nkd1Q99MH6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.07■□□□□ 0.32
Nkd1Q99MH6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nkd1Q99MH6 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkd1Q99MH6 Reep4-203ENSMUST00000226563 1444 ntBASIC17.07■□□□□ 0.32
Nkd1Q99MH6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkd1Q99MH6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.07■□□□□ 0.32
Nkd1Q99MH6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.07■□□□□ 0.32
Nkd1Q99MH6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.07■□□□□ 0.32
Nkd1Q99MH6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.07■□□□□ 0.32
Nkd1Q99MH6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkd1Q99MH6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkd1Q99MH6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkd1Q99MH6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkd1Q99MH6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nkd1Q99MH6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.07■□□□□ 0.32
Nkd1Q99MH6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkd1Q99MH6 Fst-202ENSMUST00000223640 2612 ntBASIC17.06■□□□□ 0.32
Nkd1Q99MH6 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.06■□□□□ 0.32
Nkd1Q99MH6 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkd1Q99MH6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkd1Q99MH6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkd1Q99MH6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nkd1Q99MH6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nkd1Q99MH6 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.06■□□□□ 0.32
Nkd1Q99MH6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkd1Q99MH6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkd1Q99MH6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkd1Q99MH6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nkd1Q99MH6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkd1Q99MH6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Nkd1Q99MH6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nkd1Q99MH6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkd1Q99MH6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Nkd1Q99MH6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkd1Q99MH6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkd1Q99MH6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkd1Q99MH6 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
Nkd1Q99MH6 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkd1Q99MH6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkd1Q99MH6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkd1Q99MH6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkd1Q99MH6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkd1Q99MH6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Nkd1Q99MH6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkd1Q99MH6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkd1Q99MH6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkd1Q99MH6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkd1Q99MH6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Nkd1Q99MH6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkd1Q99MH6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkd1Q99MH6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkd1Q99MH6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkd1Q99MH6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkd1Q99MH6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkd1Q99MH6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkd1Q99MH6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkd1Q99MH6 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nkd1Q99MH6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.04■□□□□ 0.32
Nkd1Q99MH6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nkd1Q99MH6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.04■□□□□ 0.32
Nkd1Q99MH6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Nkd1Q99MH6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Nkd1Q99MH6 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkd1Q99MH6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkd1Q99MH6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Nkd1Q99MH6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkd1Q99MH6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkd1Q99MH6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkd1Q99MH6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkd1Q99MH6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkd1Q99MH6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nkd1Q99MH6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nkd1Q99MH6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkd1Q99MH6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nkd1Q99MH6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.03■□□□□ 0.32
Nkd1Q99MH6 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.03■□□□□ 0.32
Nkd1Q99MH6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Nkd1Q99MH6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkd1Q99MH6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nkd1Q99MH6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkd1Q99MH6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nkd1Q99MH6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Nkd1Q99MH6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.03■□□□□ 0.32
Nkd1Q99MH6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkd1Q99MH6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nkd1Q99MH6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nkd1Q99MH6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkd1Q99MH6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkd1Q99MH6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms