Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Nkx6-1Q99MA9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx6-1Q99MA9 Gm18101-201ENSMUST00000215769 548 ntBASIC16.92■□□□□ 0.3
Nkx6-1Q99MA9 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.92■□□□□ 0.3
Nkx6-1Q99MA9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx6-1Q99MA9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx6-1Q99MA9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Nkx6-1Q99MA9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx6-1Q99MA9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Nkx6-1Q99MA9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Nkx6-1Q99MA9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.91■□□□□ 0.3
Nkx6-1Q99MA9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Nkx6-1Q99MA9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx6-1Q99MA9 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx6-1Q99MA9 Gm2274-201ENSMUST00000184539 609 ntBASIC16.91■□□□□ 0.3
Nkx6-1Q99MA9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Nkx6-1Q99MA9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx6-1Q99MA9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Nkx6-1Q99MA9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx6-1Q99MA9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Nkx6-1Q99MA9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx6-1Q99MA9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx6-1Q99MA9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx6-1Q99MA9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx6-1Q99MA9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx6-1Q99MA9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx6-1Q99MA9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Nkx6-1Q99MA9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx6-1Q99MA9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx6-1Q99MA9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx6-1Q99MA9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.9■□□□□ 0.3
Nkx6-1Q99MA9 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.9■□□□□ 0.3
Nkx6-1Q99MA9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx6-1Q99MA9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx6-1Q99MA9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx6-1Q99MA9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx6-1Q99MA9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx6-1Q99MA9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx6-1Q99MA9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Nkx6-1Q99MA9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx6-1Q99MA9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx6-1Q99MA9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx6-1Q99MA9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.89■□□□□ 0.29
Nkx6-1Q99MA9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.89■□□□□ 0.29
Nkx6-1Q99MA9 Gm22697-201ENSMUST00000175194 63 ntBASIC16.89■□□□□ 0.29
Nkx6-1Q99MA9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Nkx6-1Q99MA9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx6-1Q99MA9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx6-1Q99MA9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx6-1Q99MA9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx6-1Q99MA9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx6-1Q99MA9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx6-1Q99MA9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx6-1Q99MA9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.89■□□□□ 0.29
Nkx6-1Q99MA9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx6-1Q99MA9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.89■□□□□ 0.29
Nkx6-1Q99MA9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Nkx6-1Q99MA9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx6-1Q99MA9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Nkx6-1Q99MA9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.88■□□□□ 0.29
Nkx6-1Q99MA9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx6-1Q99MA9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx6-1Q99MA9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx6-1Q99MA9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx6-1Q99MA9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx6-1Q99MA9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx6-1Q99MA9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.88■□□□□ 0.29
Nkx6-1Q99MA9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx6-1Q99MA9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.88■□□□□ 0.29
Nkx6-1Q99MA9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx6-1Q99MA9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx6-1Q99MA9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx6-1Q99MA9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Nkx6-1Q99MA9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx6-1Q99MA9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx6-1Q99MA9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Nkx6-1Q99MA9 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.88■□□□□ 0.29
Nkx6-1Q99MA9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx6-1Q99MA9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx6-1Q99MA9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.87■□□□□ 0.29
Nkx6-1Q99MA9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.87■□□□□ 0.29
Nkx6-1Q99MA9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx6-1Q99MA9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx6-1Q99MA9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx6-1Q99MA9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Nkx6-1Q99MA9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx6-1Q99MA9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx6-1Q99MA9 Gm7284-201ENSMUST00000131667 944 ntBASIC16.87■□□□□ 0.29
Nkx6-1Q99MA9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.87■□□□□ 0.29
Nkx6-1Q99MA9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Nkx6-1Q99MA9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx6-1Q99MA9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx6-1Q99MA9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Nkx6-1Q99MA9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.87■□□□□ 0.29
Nkx6-1Q99MA9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx6-1Q99MA9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx6-1Q99MA9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx6-1Q99MA9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx6-1Q99MA9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx6-1Q99MA9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms