Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.75■□□□□ 0.27
Cdca3Q99M54 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdca3Q99M54 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdca3Q99M54 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cdca3Q99M54 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.74■□□□□ 0.27
Cdca3Q99M54 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.74■□□□□ 0.27
Cdca3Q99M54 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdca3Q99M54 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdca3Q99M54 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdca3Q99M54 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdca3Q99M54 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdca3Q99M54 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cdca3Q99M54 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Cdca3Q99M54 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdca3Q99M54 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cdca3Q99M54 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdca3Q99M54 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.74■□□□□ 0.27
Cdca3Q99M54 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdca3Q99M54 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.74■□□□□ 0.27
Cdca3Q99M54 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdca3Q99M54 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdca3Q99M54 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdca3Q99M54 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdca3Q99M54 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Cdca3Q99M54 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdca3Q99M54 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdca3Q99M54 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdca3Q99M54 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdca3Q99M54 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.73■□□□□ 0.27
Cdca3Q99M54 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.73■□□□□ 0.27
Cdca3Q99M54 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdca3Q99M54 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdca3Q99M54 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdca3Q99M54 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdca3Q99M54 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdca3Q99M54 Grk6-206ENSMUST00000224995 2971 ntBASIC16.73■□□□□ 0.27
Cdca3Q99M54 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdca3Q99M54 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdca3Q99M54 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.73■□□□□ 0.27
Cdca3Q99M54 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdca3Q99M54 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdca3Q99M54 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.73■□□□□ 0.27
Cdca3Q99M54 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.73■□□□□ 0.27
Cdca3Q99M54 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Cdca3Q99M54 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdca3Q99M54 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdca3Q99M54 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdca3Q99M54 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Cdca3Q99M54 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdca3Q99M54 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdca3Q99M54 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdca3Q99M54 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.72■□□□□ 0.27
Cdca3Q99M54 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.72■□□□□ 0.27
Cdca3Q99M54 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdca3Q99M54 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdca3Q99M54 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.72■□□□□ 0.27
Cdca3Q99M54 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
Cdca3Q99M54 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdca3Q99M54 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdca3Q99M54 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.72■□□□□ 0.27
Cdca3Q99M54 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.72■□□□□ 0.27
Cdca3Q99M54 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdca3Q99M54 Rab3c-203ENSMUST00000224180 967 ntBASIC16.72■□□□□ 0.27
Cdca3Q99M54 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.72■□□□□ 0.27
Cdca3Q99M54 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdca3Q99M54 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdca3Q99M54 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdca3Q99M54 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdca3Q99M54 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.72■□□□□ 0.27
Cdca3Q99M54 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdca3Q99M54 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdca3Q99M54 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdca3Q99M54 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdca3Q99M54 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdca3Q99M54 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdca3Q99M54 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdca3Q99M54 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdca3Q99M54 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdca3Q99M54 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdca3Q99M54 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdca3Q99M54 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdca3Q99M54 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.71■□□□□ 0.27
Cdca3Q99M54 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.71■□□□□ 0.27
Cdca3Q99M54 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdca3Q99M54 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdca3Q99M54 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.71■□□□□ 0.27
Cdca3Q99M54 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdca3Q99M54 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Cdca3Q99M54 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdca3Q99M54 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdca3Q99M54 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdca3Q99M54 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdca3Q99M54 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.71■□□□□ 0.27
Cdca3Q99M54 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdca3Q99M54 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdca3Q99M54 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdca3Q99M54 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdca3Q99M54 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdca3Q99M54 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdca3Q99M54 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms