Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cstf1Q99LC2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cstf1Q99LC2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.02■□□□□ 0.48
Cstf1Q99LC2 Gm14859-201ENSMUST00000117752 357 ntBASIC18.02■□□□□ 0.48
Cstf1Q99LC2 Gm9103-201ENSMUST00000119371 405 ntBASIC18.02■□□□□ 0.48
Cstf1Q99LC2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cstf1Q99LC2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.02■□□□□ 0.48
Cstf1Q99LC2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cstf1Q99LC2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cstf1Q99LC2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cstf1Q99LC2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.02■□□□□ 0.48
Cstf1Q99LC2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cstf1Q99LC2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.02■□□□□ 0.48
Cstf1Q99LC2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cstf1Q99LC2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cstf1Q99LC2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Cstf1Q99LC2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cstf1Q99LC2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cstf1Q99LC2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cstf1Q99LC2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cstf1Q99LC2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.01■□□□□ 0.47
Cstf1Q99LC2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cstf1Q99LC2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cstf1Q99LC2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cstf1Q99LC2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cstf1Q99LC2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cstf1Q99LC2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cstf1Q99LC2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf1Q99LC2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf1Q99LC2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18■□□□□ 0.47
Cstf1Q99LC2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cstf1Q99LC2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cstf1Q99LC2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cstf1Q99LC2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18■□□□□ 0.47
Cstf1Q99LC2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cstf1Q99LC2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf1Q99LC2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18■□□□□ 0.47
Cstf1Q99LC2 Gm18101-201ENSMUST00000215769 548 ntBASIC18■□□□□ 0.47
Cstf1Q99LC2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf1Q99LC2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf1Q99LC2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18■□□□□ 0.47
Cstf1Q99LC2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf1Q99LC2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf1Q99LC2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18■□□□□ 0.47
Cstf1Q99LC2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf1Q99LC2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cstf1Q99LC2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cstf1Q99LC2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.99■□□□□ 0.47
Cstf1Q99LC2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cstf1Q99LC2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.99■□□□□ 0.47
Cstf1Q99LC2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.99■□□□□ 0.47
Cstf1Q99LC2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.99■□□□□ 0.47
Cstf1Q99LC2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cstf1Q99LC2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cstf1Q99LC2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cstf1Q99LC2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cstf1Q99LC2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cstf1Q99LC2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cstf1Q99LC2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cstf1Q99LC2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.98■□□□□ 0.47
Cstf1Q99LC2 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.98■□□□□ 0.47
Cstf1Q99LC2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf1Q99LC2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf1Q99LC2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf1Q99LC2 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.98■□□□□ 0.47
Cstf1Q99LC2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cstf1Q99LC2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf1Q99LC2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf1Q99LC2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.98■□□□□ 0.47
Cstf1Q99LC2 Gm18032-201ENSMUST00000222541 538 ntBASIC17.98■□□□□ 0.47
Cstf1Q99LC2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Cstf1Q99LC2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf1Q99LC2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cstf1Q99LC2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf1Q99LC2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf1Q99LC2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf1Q99LC2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf1Q99LC2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf1Q99LC2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf1Q99LC2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cstf1Q99LC2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cstf1Q99LC2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Cstf1Q99LC2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cstf1Q99LC2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cstf1Q99LC2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cstf1Q99LC2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cstf1Q99LC2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cstf1Q99LC2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cstf1Q99LC2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.96■□□□□ 0.47
Cstf1Q99LC2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cstf1Q99LC2 Ank2-226ENSMUST00000189368 339 ntBASIC17.96■□□□□ 0.47
Cstf1Q99LC2 Gm45058-201ENSMUST00000205810 766 ntBASIC17.96■□□□□ 0.47
Cstf1Q99LC2 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.96■□□□□ 0.47
Cstf1Q99LC2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
Cstf1Q99LC2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cstf1Q99LC2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cstf1Q99LC2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cstf1Q99LC2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cstf1Q99LC2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cstf1Q99LC2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms