Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prdm9Q96EQ9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prdm9Q96EQ9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prdm9Q96EQ9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prdm9Q96EQ9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Prdm9Q96EQ9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Prdm9Q96EQ9 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.76■□□□□ 0.43
Prdm9Q96EQ9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prdm9Q96EQ9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.76■□□□□ 0.43
Prdm9Q96EQ9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prdm9Q96EQ9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prdm9Q96EQ9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prdm9Q96EQ9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prdm9Q96EQ9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Prdm9Q96EQ9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.76■□□□□ 0.43
Prdm9Q96EQ9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prdm9Q96EQ9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prdm9Q96EQ9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Prdm9Q96EQ9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prdm9Q96EQ9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Prdm9Q96EQ9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prdm9Q96EQ9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Prdm9Q96EQ9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.75■□□□□ 0.43
Prdm9Q96EQ9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prdm9Q96EQ9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.75■□□□□ 0.43
Prdm9Q96EQ9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.75■□□□□ 0.43
Prdm9Q96EQ9 Mir1199-201ENSMUST00000117015 119 ntBASIC17.75■□□□□ 0.43
Prdm9Q96EQ9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prdm9Q96EQ9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.75■□□□□ 0.43
Prdm9Q96EQ9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.75■□□□□ 0.43
Prdm9Q96EQ9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Prdm9Q96EQ9 Gm18025-201ENSMUST00000221733 862 ntBASIC17.75■□□□□ 0.43
Prdm9Q96EQ9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prdm9Q96EQ9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prdm9Q96EQ9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prdm9Q96EQ9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Prdm9Q96EQ9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prdm9Q96EQ9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prdm9Q96EQ9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prdm9Q96EQ9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prdm9Q96EQ9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.74■□□□□ 0.43
Prdm9Q96EQ9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Prdm9Q96EQ9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Prdm9Q96EQ9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Prdm9Q96EQ9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.74■□□□□ 0.43
Prdm9Q96EQ9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.74■□□□□ 0.43
Prdm9Q96EQ9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Prdm9Q96EQ9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Prdm9Q96EQ9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Prdm9Q96EQ9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Prdm9Q96EQ9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prdm9Q96EQ9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prdm9Q96EQ9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Prdm9Q96EQ9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prdm9Q96EQ9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prdm9Q96EQ9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.73■□□□□ 0.43
Prdm9Q96EQ9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prdm9Q96EQ9 Gm43183-201ENSMUST00000200632 547 ntBASIC17.73■□□□□ 0.43
Prdm9Q96EQ9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prdm9Q96EQ9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prdm9Q96EQ9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.73■□□□□ 0.43
Prdm9Q96EQ9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Prdm9Q96EQ9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prdm9Q96EQ9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prdm9Q96EQ9 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.72■□□□□ 0.43
Prdm9Q96EQ9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prdm9Q96EQ9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.72■□□□□ 0.43
Prdm9Q96EQ9 Gm42545-201ENSMUST00000202755 922 ntBASIC17.72■□□□□ 0.43
Prdm9Q96EQ9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.72■□□□□ 0.43
Prdm9Q96EQ9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prdm9Q96EQ9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Prdm9Q96EQ9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prdm9Q96EQ9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prdm9Q96EQ9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prdm9Q96EQ9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prdm9Q96EQ9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prdm9Q96EQ9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Prdm9Q96EQ9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prdm9Q96EQ9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Prdm9Q96EQ9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Prdm9Q96EQ9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.71■□□□□ 0.43
Prdm9Q96EQ9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prdm9Q96EQ9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Prdm9Q96EQ9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Prdm9Q96EQ9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prdm9Q96EQ9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prdm9Q96EQ9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prdm9Q96EQ9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Prdm9Q96EQ9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prdm9Q96EQ9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prdm9Q96EQ9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.71■□□□□ 0.43
Prdm9Q96EQ9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prdm9Q96EQ9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Prdm9Q96EQ9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.7■□□□□ 0.42
Prdm9Q96EQ9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prdm9Q96EQ9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prdm9Q96EQ9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.7■□□□□ 0.42
Prdm9Q96EQ9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Prdm9Q96EQ9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.7■□□□□ 0.42
Prdm9Q96EQ9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms