Protein–RNA interactions for Protein: Q91Y14

Pcdha6, Pcdha6 protein, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha6Q91Y14 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha6Q91Y14 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha6Q91Y14 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdha6Q91Y14 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdha6Q91Y14 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha6Q91Y14 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdha6Q91Y14 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha6Q91Y14 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Pcdha6Q91Y14 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha6Q91Y14 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha6Q91Y14 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha6Q91Y14 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Pcdha6Q91Y14 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha6Q91Y14 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha6Q91Y14 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdha6Q91Y14 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha6Q91Y14 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.03■□□□□ 0.48
Pcdha6Q91Y14 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
Pcdha6Q91Y14 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha6Q91Y14 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha6Q91Y14 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pcdha6Q91Y14 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha6Q91Y14 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha6Q91Y14 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha6Q91Y14 Gm10849-201ENSMUST00000100397 618 ntBASIC18.02■□□□□ 0.48
Pcdha6Q91Y14 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
Pcdha6Q91Y14 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha6Q91Y14 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha6Q91Y14 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.02■□□□□ 0.48
Pcdha6Q91Y14 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha6Q91Y14 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Pcdha6Q91Y14 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Pcdha6Q91Y14 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
Pcdha6Q91Y14 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdha6Q91Y14 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.02■□□□□ 0.47
Pcdha6Q91Y14 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdha6Q91Y14 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
Pcdha6Q91Y14 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha6Q91Y14 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha6Q91Y14 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha6Q91Y14 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.01■□□□□ 0.47
Pcdha6Q91Y14 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha6Q91Y14 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdha6Q91Y14 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha6Q91Y14 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha6Q91Y14 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha6Q91Y14 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha6Q91Y14 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha6Q91Y14 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha6Q91Y14 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha6Q91Y14 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha6Q91Y14 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha6Q91Y14 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha6Q91Y14 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18■□□□□ 0.47
Pcdha6Q91Y14 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdha6Q91Y14 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha6Q91Y14 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdha6Q91Y14 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha6Q91Y14 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha6Q91Y14 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Pcdha6Q91Y14 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
Pcdha6Q91Y14 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.99■□□□□ 0.47
Pcdha6Q91Y14 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha6Q91Y14 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Pcdha6Q91Y14 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdha6Q91Y14 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.99■□□□□ 0.47
Pcdha6Q91Y14 Gm6365-201ENSMUST00000054711 744 ntBASIC17.99■□□□□ 0.47
Pcdha6Q91Y14 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha6Q91Y14 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha6Q91Y14 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.99■□□□□ 0.47
Pcdha6Q91Y14 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha6Q91Y14 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha6Q91Y14 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha6Q91Y14 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha6Q91Y14 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdha6Q91Y14 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha6Q91Y14 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdha6Q91Y14 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha6Q91Y14 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.98■□□□□ 0.47
Pcdha6Q91Y14 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha6Q91Y14 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha6Q91Y14 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha6Q91Y14 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha6Q91Y14 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha6Q91Y14 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Pcdha6Q91Y14 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha6Q91Y14 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha6Q91Y14 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha6Q91Y14 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha6Q91Y14 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha6Q91Y14 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha6Q91Y14 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.98■□□□□ 0.47
Pcdha6Q91Y14 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha6Q91Y14 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha6Q91Y14 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.97■□□□□ 0.47
Pcdha6Q91Y14 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha6Q91Y14 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha6Q91Y14 Gm42569-201ENSMUST00000200539 472 ntBASIC17.97■□□□□ 0.47
Pcdha6Q91Y14 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha6Q91Y14 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms