Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha8Q91Y12 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pcdha8Q91Y12 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pcdha8Q91Y12 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha8Q91Y12 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdha8Q91Y12 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdha8Q91Y12 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdha8Q91Y12 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdha8Q91Y12 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdha8Q91Y12 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha8Q91Y12 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha8Q91Y12 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pcdha8Q91Y12 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.58■□□□□ 0.4
Pcdha8Q91Y12 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha8Q91Y12 Gm7291-201ENSMUST00000199147 382 ntBASIC17.58■□□□□ 0.4
Pcdha8Q91Y12 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.58■□□□□ 0.4
Pcdha8Q91Y12 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha8Q91Y12 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha8Q91Y12 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha8Q91Y12 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Pcdha8Q91Y12 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha8Q91Y12 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha8Q91Y12 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Pcdha8Q91Y12 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha8Q91Y12 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha8Q91Y12 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha8Q91Y12 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Pcdha8Q91Y12 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.57■□□□□ 0.4
Pcdha8Q91Y12 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdha8Q91Y12 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdha8Q91Y12 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha8Q91Y12 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha8Q91Y12 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha8Q91Y12 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdha8Q91Y12 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha8Q91Y12 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdha8Q91Y12 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha8Q91Y12 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdha8Q91Y12 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.56■□□□□ 0.4
Pcdha8Q91Y12 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha8Q91Y12 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha8Q91Y12 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha8Q91Y12 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha8Q91Y12 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha8Q91Y12 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.56■□□□□ 0.4
Pcdha8Q91Y12 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdha8Q91Y12 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha8Q91Y12 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha8Q91Y12 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha8Q91Y12 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha8Q91Y12 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha8Q91Y12 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha8Q91Y12 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Pcdha8Q91Y12 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha8Q91Y12 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha8Q91Y12 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha8Q91Y12 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha8Q91Y12 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha8Q91Y12 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha8Q91Y12 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pcdha8Q91Y12 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha8Q91Y12 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pcdha8Q91Y12 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.55■□□□□ 0.4
Pcdha8Q91Y12 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha8Q91Y12 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha8Q91Y12 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha8Q91Y12 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha8Q91Y12 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha8Q91Y12 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha8Q91Y12 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdha8Q91Y12 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdha8Q91Y12 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha8Q91Y12 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdha8Q91Y12 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdha8Q91Y12 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdha8Q91Y12 Gm22325-201ENSMUST00000158904 308 ntBASIC17.54■□□□□ 0.4
Pcdha8Q91Y12 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha8Q91Y12 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha8Q91Y12 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha8Q91Y12 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha8Q91Y12 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdha8Q91Y12 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha8Q91Y12 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha8Q91Y12 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.53■□□□□ 0.4
Pcdha8Q91Y12 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha8Q91Y12 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdha8Q91Y12 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha8Q91Y12 Gm6211-202ENSMUST00000167849 925 ntBASIC17.53■□□□□ 0.4
Pcdha8Q91Y12 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha8Q91Y12 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdha8Q91Y12 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha8Q91Y12 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha8Q91Y12 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pcdha8Q91Y12 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha8Q91Y12 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Pcdha8Q91Y12 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha8Q91Y12 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha8Q91Y12 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha8Q91Y12 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha8Q91Y12 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms