Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhac2Q91Y09 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.68■□□□□ 0.74
Pcdhac2Q91Y09 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhac2Q91Y09 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdhac2Q91Y09 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhac2Q91Y09 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.68■□□□□ 0.74
Pcdhac2Q91Y09 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pcdhac2Q91Y09 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhac2Q91Y09 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pcdhac2Q91Y09 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhac2Q91Y09 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhac2Q91Y09 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdhac2Q91Y09 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhac2Q91Y09 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.67■□□□□ 0.74
Pcdhac2Q91Y09 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhac2Q91Y09 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhac2Q91Y09 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhac2Q91Y09 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhac2Q91Y09 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdhac2Q91Y09 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pcdhac2Q91Y09 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Pcdhac2Q91Y09 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhac2Q91Y09 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Pcdhac2Q91Y09 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhac2Q91Y09 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhac2Q91Y09 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhac2Q91Y09 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.66■□□□□ 0.74
Pcdhac2Q91Y09 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhac2Q91Y09 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhac2Q91Y09 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.66■□□□□ 0.74
Pcdhac2Q91Y09 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhac2Q91Y09 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhac2Q91Y09 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.65■□□□□ 0.74
Pcdhac2Q91Y09 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.65■□□□□ 0.74
Pcdhac2Q91Y09 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Pcdhac2Q91Y09 Gm21362-201ENSMUST00000194272 928 ntBASIC19.65■□□□□ 0.74
Pcdhac2Q91Y09 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhac2Q91Y09 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Pcdhac2Q91Y09 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdhac2Q91Y09 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Pcdhac2Q91Y09 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhac2Q91Y09 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhac2Q91Y09 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhac2Q91Y09 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhac2Q91Y09 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Pcdhac2Q91Y09 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhac2Q91Y09 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.64■□□□□ 0.73
Pcdhac2Q91Y09 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.64■□□□□ 0.73
Pcdhac2Q91Y09 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhac2Q91Y09 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhac2Q91Y09 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.63■□□□□ 0.73
Pcdhac2Q91Y09 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhac2Q91Y09 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.63■□□□□ 0.73
Pcdhac2Q91Y09 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhac2Q91Y09 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.63■□□□□ 0.73
Pcdhac2Q91Y09 Gm10517-202ENSMUST00000192970 758 ntBASIC19.63■□□□□ 0.73
Pcdhac2Q91Y09 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Pcdhac2Q91Y09 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.63■□□□□ 0.73
Pcdhac2Q91Y09 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Pcdhac2Q91Y09 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhac2Q91Y09 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhac2Q91Y09 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhac2Q91Y09 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pcdhac2Q91Y09 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhac2Q91Y09 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.62■□□□□ 0.73
Pcdhac2Q91Y09 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhac2Q91Y09 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhac2Q91Y09 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhac2Q91Y09 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhac2Q91Y09 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhac2Q91Y09 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhac2Q91Y09 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhac2Q91Y09 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhac2Q91Y09 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdhac2Q91Y09 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdhac2Q91Y09 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Pcdhac2Q91Y09 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhac2Q91Y09 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.61■□□□□ 0.73
Pcdhac2Q91Y09 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.61■□□□□ 0.73
Pcdhac2Q91Y09 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhac2Q91Y09 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhac2Q91Y09 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.61■□□□□ 0.73
Pcdhac2Q91Y09 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhac2Q91Y09 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Pcdhac2Q91Y09 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhac2Q91Y09 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhac2Q91Y09 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhac2Q91Y09 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhac2Q91Y09 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdhac2Q91Y09 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdhac2Q91Y09 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhac2Q91Y09 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhac2Q91Y09 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhac2Q91Y09 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhac2Q91Y09 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.6■□□□□ 0.73
Pcdhac2Q91Y09 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhac2Q91Y09 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhac2Q91Y09 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhac2Q91Y09 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhac2Q91Y09 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms