Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb6Q91XZ4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb6Q91XZ4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Pcdhb6Q91XZ4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Pcdhb6Q91XZ4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb6Q91XZ4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcdhb6Q91XZ4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Pcdhb6Q91XZ4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.58■□□□□ 0.56
Pcdhb6Q91XZ4 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.58■□□□□ 0.56
Pcdhb6Q91XZ4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb6Q91XZ4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Pcdhb6Q91XZ4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Pcdhb6Q91XZ4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Pcdhb6Q91XZ4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb6Q91XZ4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb6Q91XZ4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcdhb6Q91XZ4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb6Q91XZ4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb6Q91XZ4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb6Q91XZ4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhb6Q91XZ4 Gm38285-201ENSMUST00000192928 922 ntBASIC18.57■□□□□ 0.56
Pcdhb6Q91XZ4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdhb6Q91XZ4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.57■□□□□ 0.56
Pcdhb6Q91XZ4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pcdhb6Q91XZ4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.57■□□□□ 0.56
Pcdhb6Q91XZ4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pcdhb6Q91XZ4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb6Q91XZ4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb6Q91XZ4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb6Q91XZ4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pcdhb6Q91XZ4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb6Q91XZ4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
Pcdhb6Q91XZ4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb6Q91XZ4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhb6Q91XZ4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb6Q91XZ4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhb6Q91XZ4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb6Q91XZ4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb6Q91XZ4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb6Q91XZ4 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.56■□□□□ 0.56
Pcdhb6Q91XZ4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Pcdhb6Q91XZ4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb6Q91XZ4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb6Q91XZ4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhb6Q91XZ4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb6Q91XZ4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Pcdhb6Q91XZ4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb6Q91XZ4 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.56■□□□□ 0.56
Pcdhb6Q91XZ4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb6Q91XZ4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdhb6Q91XZ4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdhb6Q91XZ4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb6Q91XZ4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb6Q91XZ4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb6Q91XZ4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhb6Q91XZ4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb6Q91XZ4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhb6Q91XZ4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb6Q91XZ4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb6Q91XZ4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb6Q91XZ4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb6Q91XZ4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb6Q91XZ4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb6Q91XZ4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb6Q91XZ4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb6Q91XZ4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb6Q91XZ4 Zfp783-201ENSMUST00000095946 670 ntBASIC18.55■□□□□ 0.56
Pcdhb6Q91XZ4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb6Q91XZ4 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.55■□□□□ 0.56
Pcdhb6Q91XZ4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb6Q91XZ4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhb6Q91XZ4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb6Q91XZ4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb6Q91XZ4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb6Q91XZ4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb6Q91XZ4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb6Q91XZ4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb6Q91XZ4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Pcdhb6Q91XZ4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb6Q91XZ4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb6Q91XZ4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb6Q91XZ4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb6Q91XZ4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb6Q91XZ4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb6Q91XZ4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb6Q91XZ4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb6Q91XZ4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb6Q91XZ4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb6Q91XZ4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb6Q91XZ4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb6Q91XZ4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
Pcdhb6Q91XZ4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb6Q91XZ4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb6Q91XZ4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhb6Q91XZ4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdhb6Q91XZ4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.53■□□□□ 0.56
Pcdhb6Q91XZ4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb6Q91XZ4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb6Q91XZ4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb6Q91XZ4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms