Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga4Q91XY4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga4Q91XY4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga4Q91XY4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhga4Q91XY4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga4Q91XY4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhga4Q91XY4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga4Q91XY4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga4Q91XY4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga4Q91XY4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga4Q91XY4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga4Q91XY4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhga4Q91XY4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga4Q91XY4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga4Q91XY4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhga4Q91XY4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga4Q91XY4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Pcdhga4Q91XY4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga4Q91XY4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdhga4Q91XY4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga4Q91XY4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga4Q91XY4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhga4Q91XY4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhga4Q91XY4 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.75■□□□□ 0.43
Pcdhga4Q91XY4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdhga4Q91XY4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga4Q91XY4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga4Q91XY4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga4Q91XY4 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.74■□□□□ 0.43
Pcdhga4Q91XY4 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.74■□□□□ 0.43
Pcdhga4Q91XY4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga4Q91XY4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhga4Q91XY4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga4Q91XY4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga4Q91XY4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga4Q91XY4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga4Q91XY4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga4Q91XY4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga4Q91XY4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga4Q91XY4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga4Q91XY4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga4Q91XY4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga4Q91XY4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga4Q91XY4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga4Q91XY4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga4Q91XY4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga4Q91XY4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdhga4Q91XY4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga4Q91XY4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga4Q91XY4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga4Q91XY4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.73■□□□□ 0.43
Pcdhga4Q91XY4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.73■□□□□ 0.43
Pcdhga4Q91XY4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdhga4Q91XY4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga4Q91XY4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga4Q91XY4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhga4Q91XY4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga4Q91XY4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.73■□□□□ 0.43
Pcdhga4Q91XY4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga4Q91XY4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga4Q91XY4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga4Q91XY4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga4Q91XY4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga4Q91XY4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga4Q91XY4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga4Q91XY4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga4Q91XY4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga4Q91XY4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga4Q91XY4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhga4Q91XY4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga4Q91XY4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.72■□□□□ 0.43
Pcdhga4Q91XY4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga4Q91XY4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga4Q91XY4 Gm20760-201ENSMUST00000179197 648 ntBASIC17.72■□□□□ 0.43
Pcdhga4Q91XY4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdhga4Q91XY4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga4Q91XY4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga4Q91XY4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga4Q91XY4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga4Q91XY4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga4Q91XY4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga4Q91XY4 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.72■□□□□ 0.43
Pcdhga4Q91XY4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga4Q91XY4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdhga4Q91XY4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga4Q91XY4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga4Q91XY4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga4Q91XY4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga4Q91XY4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdhga4Q91XY4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.71■□□□□ 0.43
Pcdhga4Q91XY4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga4Q91XY4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga4Q91XY4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga4Q91XY4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga4Q91XY4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga4Q91XY4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Pcdhga4Q91XY4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga4Q91XY4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga4Q91XY4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhga4Q91XY4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms