Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb11Q91UZ8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhb11Q91UZ8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhb11Q91UZ8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb11Q91UZ8 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.52■□□□□ 0.56
Pcdhb11Q91UZ8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb11Q91UZ8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Pcdhb11Q91UZ8 Gm2399-201ENSMUST00000104944 225 ntBASIC18.52■□□□□ 0.56
Pcdhb11Q91UZ8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Pcdhb11Q91UZ8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Pcdhb11Q91UZ8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb11Q91UZ8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb11Q91UZ8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb11Q91UZ8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb11Q91UZ8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb11Q91UZ8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.52■□□□□ 0.55
Pcdhb11Q91UZ8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.52■□□□□ 0.55
Pcdhb11Q91UZ8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb11Q91UZ8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb11Q91UZ8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb11Q91UZ8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb11Q91UZ8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhb11Q91UZ8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhb11Q91UZ8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb11Q91UZ8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb11Q91UZ8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb11Q91UZ8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhb11Q91UZ8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb11Q91UZ8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb11Q91UZ8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb11Q91UZ8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.51■□□□□ 0.55
Pcdhb11Q91UZ8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Pcdhb11Q91UZ8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhb11Q91UZ8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb11Q91UZ8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb11Q91UZ8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb11Q91UZ8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb11Q91UZ8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb11Q91UZ8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcdhb11Q91UZ8 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.5■□□□□ 0.55
Pcdhb11Q91UZ8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcdhb11Q91UZ8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhb11Q91UZ8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb11Q91UZ8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb11Q91UZ8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb11Q91UZ8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhb11Q91UZ8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.5■□□□□ 0.55
Pcdhb11Q91UZ8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.5■□□□□ 0.55
Pcdhb11Q91UZ8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcdhb11Q91UZ8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb11Q91UZ8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcdhb11Q91UZ8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb11Q91UZ8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb11Q91UZ8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb11Q91UZ8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb11Q91UZ8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhb11Q91UZ8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb11Q91UZ8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb11Q91UZ8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb11Q91UZ8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb11Q91UZ8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb11Q91UZ8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.49■□□□□ 0.55
Pcdhb11Q91UZ8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb11Q91UZ8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb11Q91UZ8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb11Q91UZ8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb11Q91UZ8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb11Q91UZ8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb11Q91UZ8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb11Q91UZ8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb11Q91UZ8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhb11Q91UZ8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb11Q91UZ8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb11Q91UZ8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb11Q91UZ8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb11Q91UZ8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.48■□□□□ 0.55
Pcdhb11Q91UZ8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb11Q91UZ8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhb11Q91UZ8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhb11Q91UZ8 Tgds-204ENSMUST00000228543 1594 ntBASIC18.48■□□□□ 0.55
Pcdhb11Q91UZ8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb11Q91UZ8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb11Q91UZ8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.48■□□□□ 0.55
Pcdhb11Q91UZ8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.48■□□□□ 0.55
Pcdhb11Q91UZ8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.48■□□□□ 0.55
Pcdhb11Q91UZ8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.48■□□□□ 0.55
Pcdhb11Q91UZ8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Pcdhb11Q91UZ8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhb11Q91UZ8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb11Q91UZ8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.48■□□□□ 0.55
Pcdhb11Q91UZ8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb11Q91UZ8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhb11Q91UZ8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb11Q91UZ8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb11Q91UZ8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhb11Q91UZ8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb11Q91UZ8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb11Q91UZ8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdhb11Q91UZ8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb11Q91UZ8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms