Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dnajc28Q8VCE1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.67■□□□□ 0.74
Dnajc28Q8VCE1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Dnajc28Q8VCE1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.67■□□□□ 0.74
Dnajc28Q8VCE1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dnajc28Q8VCE1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Dnajc28Q8VCE1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Dnajc28Q8VCE1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dnajc28Q8VCE1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dnajc28Q8VCE1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Dnajc28Q8VCE1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dnajc28Q8VCE1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dnajc28Q8VCE1 Gm11927-201ENSMUST00000118472 759 ntBASIC19.66■□□□□ 0.74
Dnajc28Q8VCE1 Gm15565-201ENSMUST00000118890 427 ntBASIC19.66■□□□□ 0.74
Dnajc28Q8VCE1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dnajc28Q8VCE1 Gm37055-201ENSMUST00000191866 133 ntBASIC19.66■□□□□ 0.74
Dnajc28Q8VCE1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.66■□□□□ 0.74
Dnajc28Q8VCE1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Dnajc28Q8VCE1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Dnajc28Q8VCE1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.66■□□□□ 0.74
Dnajc28Q8VCE1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dnajc28Q8VCE1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dnajc28Q8VCE1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Dnajc28Q8VCE1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dnajc28Q8VCE1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dnajc28Q8VCE1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dnajc28Q8VCE1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dnajc28Q8VCE1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dnajc28Q8VCE1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dnajc28Q8VCE1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dnajc28Q8VCE1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dnajc28Q8VCE1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Dnajc28Q8VCE1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dnajc28Q8VCE1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dnajc28Q8VCE1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dnajc28Q8VCE1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Dnajc28Q8VCE1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dnajc28Q8VCE1 Mir1199-201ENSMUST00000117015 119 ntBASIC19.65■□□□□ 0.74
Dnajc28Q8VCE1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Dnajc28Q8VCE1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dnajc28Q8VCE1 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.65■□□□□ 0.74
Dnajc28Q8VCE1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.65■□□□□ 0.74
Dnajc28Q8VCE1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dnajc28Q8VCE1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.65■□□□□ 0.74
Dnajc28Q8VCE1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.65■□□□□ 0.74
Dnajc28Q8VCE1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dnajc28Q8VCE1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Dnajc28Q8VCE1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.64■□□□□ 0.74
Dnajc28Q8VCE1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.64■□□□□ 0.73
Dnajc28Q8VCE1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Dnajc28Q8VCE1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Dnajc28Q8VCE1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.64■□□□□ 0.73
Dnajc28Q8VCE1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Dnajc28Q8VCE1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Dnajc28Q8VCE1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Dnajc28Q8VCE1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Dnajc28Q8VCE1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Dnajc28Q8VCE1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Dnajc28Q8VCE1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dnajc28Q8VCE1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dnajc28Q8VCE1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dnajc28Q8VCE1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dnajc28Q8VCE1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dnajc28Q8VCE1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Dnajc28Q8VCE1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.63■□□□□ 0.73
Dnajc28Q8VCE1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dnajc28Q8VCE1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.63■□□□□ 0.73
Dnajc28Q8VCE1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dnajc28Q8VCE1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.63■□□□□ 0.73
Dnajc28Q8VCE1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.63■□□□□ 0.73
Dnajc28Q8VCE1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dnajc28Q8VCE1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Dnajc28Q8VCE1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dnajc28Q8VCE1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Dnajc28Q8VCE1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dnajc28Q8VCE1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dnajc28Q8VCE1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Dnajc28Q8VCE1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Dnajc28Q8VCE1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Dnajc28Q8VCE1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Dnajc28Q8VCE1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Dnajc28Q8VCE1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.62■□□□□ 0.73
Dnajc28Q8VCE1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Dnajc28Q8VCE1 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.62■□□□□ 0.73
Dnajc28Q8VCE1 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.62■□□□□ 0.73
Dnajc28Q8VCE1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Dnajc28Q8VCE1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Dnajc28Q8VCE1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Dnajc28Q8VCE1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Dnajc28Q8VCE1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Dnajc28Q8VCE1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dnajc28Q8VCE1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Dnajc28Q8VCE1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Dnajc28Q8VCE1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.61■□□□□ 0.73
Dnajc28Q8VCE1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dnajc28Q8VCE1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dnajc28Q8VCE1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dnajc28Q8VCE1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Dnajc28Q8VCE1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dnajc28Q8VCE1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms