Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ndc1Q8VCB1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ndc1Q8VCB1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ndc1Q8VCB1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ndc1Q8VCB1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ndc1Q8VCB1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.03■□□□□ 0.32
Ndc1Q8VCB1 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.03■□□□□ 0.32
Ndc1Q8VCB1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ndc1Q8VCB1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ndc1Q8VCB1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ndc1Q8VCB1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Ndc1Q8VCB1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ndc1Q8VCB1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ndc1Q8VCB1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ndc1Q8VCB1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ndc1Q8VCB1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ndc1Q8VCB1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ndc1Q8VCB1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ndc1Q8VCB1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ndc1Q8VCB1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ndc1Q8VCB1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ndc1Q8VCB1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ndc1Q8VCB1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Ndc1Q8VCB1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ndc1Q8VCB1 Flg-201ENSMUST00000050758 1488 ntBASIC17.01■□□□□ 0.31
Ndc1Q8VCB1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ndc1Q8VCB1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ndc1Q8VCB1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ndc1Q8VCB1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.01■□□□□ 0.31
Ndc1Q8VCB1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.01■□□□□ 0.31
Ndc1Q8VCB1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Ndc1Q8VCB1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ndc1Q8VCB1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ndc1Q8VCB1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ndc1Q8VCB1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ndc1Q8VCB1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ndc1Q8VCB1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ndc1Q8VCB1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ndc1Q8VCB1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ndc1Q8VCB1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ndc1Q8VCB1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ndc1Q8VCB1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ndc1Q8VCB1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ndc1Q8VCB1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ndc1Q8VCB1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Ndc1Q8VCB1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ndc1Q8VCB1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Ndc1Q8VCB1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ndc1Q8VCB1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ndc1Q8VCB1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Ndc1Q8VCB1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ndc1Q8VCB1 Gm13158-201ENSMUST00000122007 736 ntBASIC17■□□□□ 0.31
Ndc1Q8VCB1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17■□□□□ 0.31
Ndc1Q8VCB1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17■□□□□ 0.31
Ndc1Q8VCB1 AC107452.1-201ENSMUST00000227963 481 ntBASIC17■□□□□ 0.31
Ndc1Q8VCB1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Ndc1Q8VCB1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ndc1Q8VCB1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ndc1Q8VCB1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Ndc1Q8VCB1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17■□□□□ 0.31
Ndc1Q8VCB1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17■□□□□ 0.31
Ndc1Q8VCB1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ndc1Q8VCB1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ndc1Q8VCB1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ndc1Q8VCB1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ndc1Q8VCB1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ndc1Q8VCB1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ndc1Q8VCB1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ndc1Q8VCB1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ndc1Q8VCB1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ndc1Q8VCB1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Ndc1Q8VCB1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.99■□□□□ 0.31
Ndc1Q8VCB1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.99■□□□□ 0.31
Ndc1Q8VCB1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ndc1Q8VCB1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ndc1Q8VCB1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ndc1Q8VCB1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ndc1Q8VCB1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ndc1Q8VCB1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ndc1Q8VCB1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ndc1Q8VCB1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 Gm11927-201ENSMUST00000118472 759 ntBASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 Gm22325-201ENSMUST00000158904 308 ntBASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms