Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3kbp1Q8R550 Grk6-206ENSMUST00000224995 2971 ntBASIC18.61■□□□□ 0.57
Sh3kbp1Q8R550 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3kbp1Q8R550 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3kbp1Q8R550 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3kbp1Q8R550 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3kbp1Q8R550 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3kbp1Q8R550 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3kbp1Q8R550 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.61■□□□□ 0.57
Sh3kbp1Q8R550 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.61■□□□□ 0.57
Sh3kbp1Q8R550 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.61■□□□□ 0.57
Sh3kbp1Q8R550 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3kbp1Q8R550 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3kbp1Q8R550 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3kbp1Q8R550 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3kbp1Q8R550 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3kbp1Q8R550 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3kbp1Q8R550 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3kbp1Q8R550 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3kbp1Q8R550 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3kbp1Q8R550 Gm44549-201ENSMUST00000208351 577 ntBASIC18.6■□□□□ 0.57
Sh3kbp1Q8R550 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3kbp1Q8R550 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.6■□□□□ 0.57
Sh3kbp1Q8R550 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3kbp1Q8R550 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3kbp1Q8R550 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3kbp1Q8R550 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3kbp1Q8R550 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3kbp1Q8R550 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3kbp1Q8R550 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3kbp1Q8R550 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.59■□□□□ 0.57
Sh3kbp1Q8R550 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3kbp1Q8R550 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3kbp1Q8R550 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3kbp1Q8R550 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3kbp1Q8R550 Mir7071-201ENSMUST00000184847 69 ntBASIC18.59■□□□□ 0.57
Sh3kbp1Q8R550 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3kbp1Q8R550 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Sh3kbp1Q8R550 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Sh3kbp1Q8R550 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3kbp1Q8R550 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3kbp1Q8R550 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3kbp1Q8R550 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3kbp1Q8R550 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh3kbp1Q8R550 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.58■□□□□ 0.57
Sh3kbp1Q8R550 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh3kbp1Q8R550 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.58■□□□□ 0.57
Sh3kbp1Q8R550 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sh3kbp1Q8R550 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3kbp1Q8R550 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3kbp1Q8R550 Mir6982-201ENSMUST00000184354 68 ntBASIC18.58■□□□□ 0.56
Sh3kbp1Q8R550 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3kbp1Q8R550 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.58■□□□□ 0.56
Sh3kbp1Q8R550 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3kbp1Q8R550 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3kbp1Q8R550 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3kbp1Q8R550 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Sh3kbp1Q8R550 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3kbp1Q8R550 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3kbp1Q8R550 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.58■□□□□ 0.56
Sh3kbp1Q8R550 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3kbp1Q8R550 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3kbp1Q8R550 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3kbp1Q8R550 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3kbp1Q8R550 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Sh3kbp1Q8R550 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3kbp1Q8R550 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3kbp1Q8R550 Gm11249-201ENSMUST00000117071 859 ntBASIC18.57■□□□□ 0.56
Sh3kbp1Q8R550 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Sh3kbp1Q8R550 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3kbp1Q8R550 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3kbp1Q8R550 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3kbp1Q8R550 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3kbp1Q8R550 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3kbp1Q8R550 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3kbp1Q8R550 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3kbp1Q8R550 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3kbp1Q8R550 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3kbp1Q8R550 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Sh3kbp1Q8R550 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Sh3kbp1Q8R550 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3kbp1Q8R550 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3kbp1Q8R550 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.56■□□□□ 0.56
Sh3kbp1Q8R550 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3kbp1Q8R550 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.56■□□□□ 0.56
Sh3kbp1Q8R550 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Sh3kbp1Q8R550 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3kbp1Q8R550 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3kbp1Q8R550 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3kbp1Q8R550 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3kbp1Q8R550 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3kbp1Q8R550 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.56■□□□□ 0.56
Sh3kbp1Q8R550 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3kbp1Q8R550 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3kbp1Q8R550 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3kbp1Q8R550 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3kbp1Q8R550 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3kbp1Q8R550 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.55■□□□□ 0.56
Sh3kbp1Q8R550 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Sh3kbp1Q8R550 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms