Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cacnb1Q8R3Z5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cacnb1Q8R3Z5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Cacnb1Q8R3Z5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.19■□□□□ 0.82
Cacnb1Q8R3Z5 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.19■□□□□ 0.82
Cacnb1Q8R3Z5 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cacnb1Q8R3Z5 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacnb1Q8R3Z5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacnb1Q8R3Z5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cacnb1Q8R3Z5 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacnb1Q8R3Z5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacnb1Q8R3Z5 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacnb1Q8R3Z5 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacnb1Q8R3Z5 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacnb1Q8R3Z5 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacnb1Q8R3Z5 Gm26524-201ENSMUST00000192339 390 ntBASIC20.18■□□□□ 0.82
Cacnb1Q8R3Z5 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC20.18■□□□□ 0.82
Cacnb1Q8R3Z5 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacnb1Q8R3Z5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacnb1Q8R3Z5 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Cacnb1Q8R3Z5 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Cacnb1Q8R3Z5 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacnb1Q8R3Z5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cacnb1Q8R3Z5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cacnb1Q8R3Z5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacnb1Q8R3Z5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacnb1Q8R3Z5 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.18■□□□□ 0.82
Cacnb1Q8R3Z5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacnb1Q8R3Z5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Cacnb1Q8R3Z5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cacnb1Q8R3Z5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacnb1Q8R3Z5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacnb1Q8R3Z5 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacnb1Q8R3Z5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacnb1Q8R3Z5 Fst-202ENSMUST00000223640 2612 ntBASIC20.17■□□□□ 0.82
Cacnb1Q8R3Z5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cacnb1Q8R3Z5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.17■□□□□ 0.82
Cacnb1Q8R3Z5 Gm44882-201ENSMUST00000205702 802 ntBASIC20.17■□□□□ 0.82
Cacnb1Q8R3Z5 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC20.17■□□□□ 0.82
Cacnb1Q8R3Z5 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacnb1Q8R3Z5 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacnb1Q8R3Z5 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacnb1Q8R3Z5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cacnb1Q8R3Z5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cacnb1Q8R3Z5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.17■□□□□ 0.82
Cacnb1Q8R3Z5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacnb1Q8R3Z5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacnb1Q8R3Z5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacnb1Q8R3Z5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Cacnb1Q8R3Z5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.16■□□□□ 0.82
Cacnb1Q8R3Z5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cacnb1Q8R3Z5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cacnb1Q8R3Z5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Cacnb1Q8R3Z5 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cacnb1Q8R3Z5 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC20.16■□□□□ 0.82
Cacnb1Q8R3Z5 Gm44353-201ENSMUST00000200618 138 ntBASIC20.16■□□□□ 0.82
Cacnb1Q8R3Z5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cacnb1Q8R3Z5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cacnb1Q8R3Z5 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.16■□□□□ 0.82
Cacnb1Q8R3Z5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacnb1Q8R3Z5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacnb1Q8R3Z5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacnb1Q8R3Z5 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.15■□□□□ 0.82
Cacnb1Q8R3Z5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.15■□□□□ 0.82
Cacnb1Q8R3Z5 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.15■□□□□ 0.82
Cacnb1Q8R3Z5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Cacnb1Q8R3Z5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacnb1Q8R3Z5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacnb1Q8R3Z5 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.15■□□□□ 0.82
Cacnb1Q8R3Z5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.15■□□□□ 0.82
Cacnb1Q8R3Z5 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.15■□□□□ 0.82
Cacnb1Q8R3Z5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacnb1Q8R3Z5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cacnb1Q8R3Z5 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cacnb1Q8R3Z5 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cacnb1Q8R3Z5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cacnb1Q8R3Z5 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cacnb1Q8R3Z5 Gm28196-201ENSMUST00000187719 640 ntBASIC20.14■□□□□ 0.81
Cacnb1Q8R3Z5 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cacnb1Q8R3Z5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cacnb1Q8R3Z5 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cacnb1Q8R3Z5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cacnb1Q8R3Z5 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cacnb1Q8R3Z5 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cacnb1Q8R3Z5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cacnb1Q8R3Z5 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC20.13■□□□□ 0.81
Cacnb1Q8R3Z5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cacnb1Q8R3Z5 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Cacnb1Q8R3Z5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Cacnb1Q8R3Z5 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cacnb1Q8R3Z5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cacnb1Q8R3Z5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cacnb1Q8R3Z5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cacnb1Q8R3Z5 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cacnb1Q8R3Z5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cacnb1Q8R3Z5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.12■□□□□ 0.81
Cacnb1Q8R3Z5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cacnb1Q8R3Z5 Rab3c-203ENSMUST00000224180 967 ntBASIC20.12■□□□□ 0.81
Cacnb1Q8R3Z5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cacnb1Q8R3Z5 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms