Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gtf3c5Q8R2T8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Gtf3c5Q8R2T8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Gtf3c5Q8R2T8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gtf3c5Q8R2T8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gtf3c5Q8R2T8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gtf3c5Q8R2T8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Gtf3c5Q8R2T8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gtf3c5Q8R2T8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gtf3c5Q8R2T8 Flg-201ENSMUST00000050758 1488 ntBASIC21.1■□□□□ 0.97
Gtf3c5Q8R2T8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gtf3c5Q8R2T8 Gm2399-201ENSMUST00000104944 225 ntBASIC21.1■□□□□ 0.97
Gtf3c5Q8R2T8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gtf3c5Q8R2T8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.1■□□□□ 0.97
Gtf3c5Q8R2T8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.1■□□□□ 0.97
Gtf3c5Q8R2T8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.1■□□□□ 0.97
Gtf3c5Q8R2T8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gtf3c5Q8R2T8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.1■□□□□ 0.97
Gtf3c5Q8R2T8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gtf3c5Q8R2T8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gtf3c5Q8R2T8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gtf3c5Q8R2T8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gtf3c5Q8R2T8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gtf3c5Q8R2T8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gtf3c5Q8R2T8 Gm45412-201ENSMUST00000210217 2275 ntBASIC21.09■□□□□ 0.97
Gtf3c5Q8R2T8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gtf3c5Q8R2T8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gtf3c5Q8R2T8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.09■□□□□ 0.97
Gtf3c5Q8R2T8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gtf3c5Q8R2T8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gtf3c5Q8R2T8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gtf3c5Q8R2T8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gtf3c5Q8R2T8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gtf3c5Q8R2T8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gtf3c5Q8R2T8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gtf3c5Q8R2T8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gtf3c5Q8R2T8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gtf3c5Q8R2T8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gtf3c5Q8R2T8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.08■□□□□ 0.97
Gtf3c5Q8R2T8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Gtf3c5Q8R2T8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.08■□□□□ 0.97
Gtf3c5Q8R2T8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.08■□□□□ 0.97
Gtf3c5Q8R2T8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gtf3c5Q8R2T8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gtf3c5Q8R2T8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gtf3c5Q8R2T8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Gtf3c5Q8R2T8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gtf3c5Q8R2T8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gtf3c5Q8R2T8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gtf3c5Q8R2T8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gtf3c5Q8R2T8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.07■□□□□ 0.96
Gtf3c5Q8R2T8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gtf3c5Q8R2T8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Gtf3c5Q8R2T8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gtf3c5Q8R2T8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gtf3c5Q8R2T8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gtf3c5Q8R2T8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gtf3c5Q8R2T8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Gtf3c5Q8R2T8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gtf3c5Q8R2T8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Gtf3c5Q8R2T8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Gtf3c5Q8R2T8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gtf3c5Q8R2T8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gtf3c5Q8R2T8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gtf3c5Q8R2T8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Gtf3c5Q8R2T8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Gtf3c5Q8R2T8 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.06■□□□□ 0.96
Gtf3c5Q8R2T8 Gm20049-201ENSMUST00000219950 730 ntBASIC21.06■□□□□ 0.96
Gtf3c5Q8R2T8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.06■□□□□ 0.96
Gtf3c5Q8R2T8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Gtf3c5Q8R2T8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gtf3c5Q8R2T8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.06■□□□□ 0.96
Gtf3c5Q8R2T8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gtf3c5Q8R2T8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Gtf3c5Q8R2T8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Gtf3c5Q8R2T8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Gtf3c5Q8R2T8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gtf3c5Q8R2T8 Gm14026-201ENSMUST00000120625 1789 ntBASIC21.05■□□□□ 0.96
Gtf3c5Q8R2T8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gtf3c5Q8R2T8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gtf3c5Q8R2T8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gtf3c5Q8R2T8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.05■□□□□ 0.96
Gtf3c5Q8R2T8 Gm29257-201ENSMUST00000186115 639 ntBASIC21.05■□□□□ 0.96
Gtf3c5Q8R2T8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gtf3c5Q8R2T8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gtf3c5Q8R2T8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gtf3c5Q8R2T8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gtf3c5Q8R2T8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gtf3c5Q8R2T8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gtf3c5Q8R2T8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gtf3c5Q8R2T8 Gm9867-201ENSMUST00000192212 2647 ntBASIC21.05■□□□□ 0.96
Gtf3c5Q8R2T8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Gtf3c5Q8R2T8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gtf3c5Q8R2T8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gtf3c5Q8R2T8 Dio3-201ENSMUST00000097228 1449 ntBASIC21.04■□□□□ 0.96
Gtf3c5Q8R2T8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gtf3c5Q8R2T8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gtf3c5Q8R2T8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gtf3c5Q8R2T8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gtf3c5Q8R2T8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms